Scomber japonicus (chub mackerel): 128355609
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Entry
128355609 CDS
T09718
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128355609 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128355609 (lrrn1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
LRR_EndoS
ig
Ig_2
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
Baculo_ODV-E27
Sp38
LSR
Ig_6
LRR_NXF1-5
LRRNT
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
128355609
NCBI-ProteinID:
XP_053171893
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All DBs
Position
3:9509331..9511520
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AA seq
717 aa
AA seq
DB search
MARRRLDCFLLGQVFAGLTLVSIGLSFVQSNECPQLCVCEIRPWFTPQSTYREAITVDCN
DLRLTRIPGNLSSDTQVLLLQSNYIARTTEELEQLFNLTELDLSQNNFSSIRDVGLTNMS
QLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINTISANAFSGLHNLLRLHLNSNKL
KTISSQWFDSTPNLEILMIGENPVVGIMDFNFKPLGNLRSLVLAGMDLTDVPGNAFVGLD
NLESLSFYDNKLVRVPQRALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMGE
LVSIDQYSLDNLPELTKLEATNNPKFSYINRQAFRDVPALESLMLNNNALNALYQSTVDS
LPNLREISIHSNPLRCDCVIQWMSSNKTTVRFMEPLSMFCATPAEVRGMHVRAVLQKNLL
NQCLPMISHDTFPNHLNLDIDMTVDLDCRAMSQPEPEIYWVTPMGNKVMRDTLSDKYSLS
SEGTLRISHIQVEDSGRYTCVAQNSEGADTRVIAIRVNGTLLDSTQLMKIYVKQTESHSI
LVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVS
NIHQQTQKSCVNVTTKQATFAVEISDQGTNTALAAVMGTMFAIISLASLGVYIAKRWKRK
NYHHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKEGSSETKPSQVDTTRSYYMW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctagacggaggttagactgctttcttttaggccaggtgtttgctggcctgaccctg
gtatcgataggactttcttttgttcagagcaatgagtgtccccagctgtgcgtgtgtgag
atacggccctggtttaccccccagtccacttacagagaagctatcactgtggattgcaat
gacctgcgcctaacacgaatccctgggaacctctcaagtgacacccaggttctcctccta
cagagtaactacattgccaggaccactgaggagctagagcagctcttcaacctcaccgag
ctggatttgtcccagaacaacttcagtagcattcgggatgttggccttaccaatatgtcc
cagctcaccacgcttcatctggaggagaaccagatcacagaaatgcctgattactgtctg
caggacctcagcaacctgcaggagctctacattaaccataatcagatcaacaccatctcc
gccaatgccttctctgggctccacaacctgctaaggcttcacctcaactccaacaagctt
aagaccatcagtagtcagtggtttgattctacacccaatctagagatcctcatgattggg
gagaatcccgttgtgggaataatggacttcaactttaagccactgggcaaccttagaagc
cttgttttggctgggatggatttgacagacgtccctggaaatgcctttgtgggacttgac
aatcttgagagcctctctttctacgacaataagctggtcagggtccctcaaagagccctc
cagaaactgcctaacctcaagttcttggatttgaacaaaaatccagtgcacaagattcag
gaaggagatttcaaaaacatgctgagactaaaagagctgggtataaacaacatgggcgag
ctggtttctattgaccagtacagtctggacaatcttcctgagctcactaagctggaggct
acaaacaaccccaagttctcctacatcaatcgtcaggcctttcgtgatgtcccagcctta
gagagtctaatgctaaacaacaacgccttgaatgccctctatcaatctactgtggactct
ctccccaacctacgtgagatcagcatccacagcaaccctcttcgctgtgactgtgtcatc
cagtggatgagctccaacaaaaccactgtccggttcatggaacctctgtctatgttttgt
gccacgccagcagaggtcaggggtatgcatgtgcgggcggtgttgcagaagaacttatta
aaccaatgcttgcccatgatttcccatgataccttccccaaccacctcaacttggacatt
gacatgacggtggacctggactgcagagccatgtctcagcctgagccggaaatatactgg
gtgacaccgatggggaacaaggtaatgagggacaccctatccgacaagtacagtctcagc
agtgaagggacattgagaatttctcatatccaagtagaagactctggcagatacacatgt
gtagctcaaaattcagaaggagctgacacaagagtgatagccatacgtgtaaacggtact
ctgttagacagcactcagcttatgaagatctacgtcaaacaaacagagtcccactcaatc
ctggtctcctggaaggtaaactcaaatgtaatgacctctaacctaaagtggtcatctgcc
accatgaaaattgacaacccacatattacttacactgccagggtacctgtggatgtccac
gagtacaaccttacgcatttacaaccggcgactgagtatgaagtgtgcctcactgtctcc
aacatccaccaacaaacacagaagtcatgcgtaaatgtgacgacaaagcaagcaactttt
gctgtggaaatatctgaccaagggacaaatactgctcttgcagcagttatgggaacaatg
tttgcaatcatcagcctggcatcactgggggtgtacattgcaaagaggtggaagaggaaa
aactatcatcattccctgaagaagtacatgcagaaaacctcgtcaataccgttaaatgag
ttgtaccctcctcttatcaacttgtgggaggcagacagtgagaaggagaaagagggctcc
tctgagaccaaacccagccaggtggacaccacacgcagctactacatgtggtga
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