Scomber japonicus (chub mackerel): 128355617
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Entry
128355617 CDS
T09718
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128355617 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128355617 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128355617 (gdf5)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Transforming growth factors (RSTK binding)
128355617 (gdf5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
128355617
NCBI-ProteinID:
XP_053171903
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Position
3:complement(37066656..37080081)
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AA seq
584 aa
AA seq
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MKVVKRCCLLLSCWTLIYLHPVLGSLSRTRPTEQHLHRLGEAAERGGGEQAHRRTGGGLG
GSTLAAGSKPVTASGTWKSSPVSPARITRIRAGPPLIKGETTIKSKLSASSSSSPGSHRA
VPGGHRAQLQHRDRGAGLGRSWSPGGHAAAFSAHAAVKGVGVAAGGGGGGPAGKTLGKVV
SRAGAAAPVRPGPQRAAPAAQRGADTRSPKLSDPQHKEPLVIPHDYMLSLYWSLSTGDLN
SSALHAAGLANTITSFVDKGQDDRGPQLRRQRYHFNISSLERDGLLGAELRILRKRLSDP
RKASMAALGSTAADGGGGGGGGASPCLKLYTCASAKQKSALLQTRTVEDLSGGFSSKWEV
FDISKVFKGFKNQQIQQLCFELEALEHRGGRPTDLRSLGFARPGRTNKEKAFFLAFGKSK
KRDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPAARGAKKPLQQPQTLPQHQAAKTQTR
PRCHRRRLHVNFKEMGWDDWIIAPLEYESFHCDGVCDFPIRSHLEPTNHAIIQTLMNSMD
PESTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtgaagcgttgttgtcttctgctgagctgctggactctcatttacctgcat
cccgtcctcggttcactcagccggaccagaccgaccgagcagcacctccaccggctcgga
gaggcagcggagcgcgggggaggagagcaggctcaccggagaaccggaggggggctcggt
gggtccacattagcagcaggcagtaaaccagtcacagcttctgggacctggaaatcatca
ccggtgagtccggcgaggatcacgcggatccgcgcgggtccaccgttaattaagggcgag
acaaccattaaaagcaaactgtctgcgtcctcatcctcatcaccgggcagccaccgggcc
gtgccgggcggccaccgggctcagctgcagcaccgggacagaggggcagggttggggcgc
tcctggtcacccggcgggcacgctgctgctttcagcgcacatgcagcagtgaaaggagtc
ggggttgcggctggtggaggaggtggaggaccagcggggaaaactttggggaaagttgtt
tccagagcgggtgcagcagctccagtgcgccccgggcctcagagagcggctccggcggcg
cagcggggggccgacaccaggagccccaaactgagcgacccgcagcacaaagagccgctg
gtgattcctcacgactacatgctgtctctgtactggtctctgtccaccggggacctgaac
agcagcgctctgcatgcagcaggtctggccaacaccatcaccagcttcgtggataaaggg
caagatgatcgcgggccccaactgagacggcagcggtatcacttcaacatcagctccctg
gaacgagacgggctcctgggggccgagctacgcatcctgaggaaacgtctgtctgacccc
cgcaaagcctccatggcagcgctgggatccacagccgccgatggaggaggaggaggagga
ggaggcgcgtccccctgcctgaagctgtacacctgcgcctcagctaaacaaaagtctgct
ctgctccagaccaggaccgtggaggatctgagcggcggattcagcagcaaatgggaagtg
ttcgacatatcaaaagtcttcaagggtttcaagaaccagcagatccagcagctgtgcttt
gagctggaagccctggagcaccgaggcggtcggcccacggatctgcgctctctggggttc
gcccgaccgggacggaccaacaaggaaaaggccttcttcttggcgttcggcaaaagcaag
aaacgcgaccttttctacaacgagatcaaagcgcggtcgggccacgacaacaagaccgtc
tacgagtatctgttcacgcagcggaggatgcggcgagctccggcagcgaggggcgccaag
aagccgctgcagcagccgcagacgctgccgcagcaccaggcggccaagacgcagacgagg
ccgcgttgccaccggagacgcctccacgtcaacttcaaggagatgggctgggacgactgg
atcatcgctccgctggagtacgagtccttccactgcgacggcgtctgcgacttccccatc
cgctcgcacctggagcccaccaaccacgccatcatacagacgctgatgaactccatggac
ccggagtcgacgccacccacctgctgcgtccccacgagactcagccccatcagcatcctc
tacatcgactcggccaacaacgtggtgtacaagcagtacgaggacatggtggtggagtcg
tgtggctgcaggtag
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