Scomber japonicus (chub mackerel): 128355630
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Entry
128355630 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128355630
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128355630
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
DUF3761
Motif
Other DBs
NCBI-GeneID:
128355630
NCBI-ProteinID:
XP_053171922
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All DBs
Position
3:complement(39199046..39210848)
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AA seq
1065 aa
AA seq
DB search
MERIHQRPDSSGPEHGPGPGPGPEPEPSCVSIKSGWSIDQPFNFKGQQPSAAKKVDQESS
EVPSGQSAQQHQTHQDSIFMLLEDNIVTFVKNELKKMQKVLSPDYPECLESQREDEEVLD
GEEEEQRRKSREAFMKITLHFLRRMKQEELADCLQSRNSAGCQSKLKSNLEKKFQCLFEG
ITKEGNPTLLNQIYTPLYITEGGTAEVNNEHEVRQIETASRKPDRPETTIRHEDIFKASP
GRDKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRQLNVLKDKKYSL
VELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLT
NLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEIRGFTDPQKEEYFSKRFRDKQQART
IISHIKTSRSLHIMCHIPVFCWITATVLENVVKSRKRGELPKTLTEMYIHFLVLQTKLKN
VKYDGGAETDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESDLTDCGIDIRAASVYSGV
FTQVFIEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLRQTTPMWSEVHKDKS
TRFYLRAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLRQTGSSSKINQETVEYIK
KKISENVSAERSINLFHCLNELNDRSLVEQIQQSLRSGSLSTVKLSPAQWSALGFILLSS
GKHLDVFDLKKYSASEEALLRLLPVVKASNKALLTDCNLSERSCAALSSVLSSQSSSLRD
LDLSNNNLQDSGLKQLSTGLQSPNCGLETLSLSGCLITEEGCASLASALRANPSHLRELD
LSYNHPGDSGERILSAGLEDPHWRLDTLSLQPAGVRWLTPGLRKYSCELTLDPNTANRKL
KLSDNNRKVTHVEMVQSYPDHPDRFDHRPQLLCRNDLTDRCYWEVEWRGTVYISVTYRGI
RRKGDSDDSRLGWNDQSWSVRCSDGGYSFWHNNSGTSPSSSSSSASGRVAVYVDCPAGTL
SFYRVSSDTLIHLHTFNTTFTEPLYAGFGFRSQDKSGSSVSLCRL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggatccatcagagaccagactcctccggacctgaacatggacctggacctgga
cctggacctgaacctgaacccagctgtgtatctataaagagtggctggtcaattgatcag
ccttttaatttcaaaggacaacaaccgtctgctgcaaagaaagtggaccaggagagctca
gaggttcccagtggtcagtctgcccagcagcatcaaacacaccaggactccatatttatg
ctgctggaggacaacatcgtcacttttgtgaagaacgagctgaagaagatgcaaaaggtt
ctgagtccagattacccagaatgcttagagagtcagagggaggatgaggaggtgttggat
ggtgaggaggaagagcagaggaggaagagcagagaggcatttatgaagatcacactgcac
ttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcagaaattctgca
gggtgtcagtccaaactcaagtctaacctggagaagaagttccagtgtctgtttgagggg
atcactaaagaaggaaacccaacccttctgaatcagatctacacaccgctctacatcaca
gagggagggactgcagaggtcaataatgaacatgaggtcagacagattgaaacagcatcc
aggaaaccagacagaccagaaacaacaatcagacatgaagacatctttaaagcctcacct
ggaagagataaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatacac
ttcacatttccattcactttcagacagctgaatgtgctgaaagataaaaagtacagcttg
gtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaa
gagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacactgagatcctgactgatgttacagagtccacctcagtggatgtgctgctgaca
aacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgca
gcagccaatcagatccctcctgagtgtgttggcatggtgacagagatcagagggttcact
gacccacagaaggaggagtacttcagtaagagattcagagataagcagcaggccagaacc
atcatctcccacatcaaaacatcacgaagcctccacatcatgtgccacatcccagttttc
tgctggatcactgctacagttctggagaatgtggtgaaaagcagaaagagaggagagctg
cccaagaccctgactgagatgtacatccacttcctggtgcttcagaccaaattgaagaat
gtcaagtatgatggaggagctgagacagatccacactggagtccagagagcaggaaaatg
attgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctat
gaatcagacctgaccgattgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcacacaggtctttatagaggagagagggctgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaggagtttttggctgctcttcatgtccatctgacattcatcaagtct
ggagtcaatctgctgagacaaacaacacccatgtggtctgaagtccataaagacaaatca
actcgtttctacctgagagctgtggacgaggccttaaagagtccgaatggacacctggac
ttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactctcctacgaggt
ctgctgagacaaacaggaagtagctcaaagatcaatcaggaaacagttgagtacatcaag
aagaagatcagtgagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaat
gaactgaatgatcgttctctagtggagcagatccaacagtccctgagatcaggaagtctc
tccacagttaaactgtctcctgctcagtggtcagctctgggcttcatcttactgtcatcg
ggaaaacatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctg
aggctgctgccagtggtcaaagcctccaacaaagctctactgactgactgtaacctctca
gaaagaagctgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagat
ctggacctgagtaacaacaacctgcaggattcaggactgaagcagctttctactggactg
cagagtccaaactgtggactggaaactctcagcctgtcaggatgtctgatcacagaggaa
ggctgtgcttctctggcctcagctctgcgtgccaacccctcccatctgagagagctggac
ctgagctacaatcatccaggagactcaggagagaggatcctgtctgctggactggaggat
ccacactggagactggacactctcagcctgcagcctgctggagtccgatggttgacacca
ggtctgaggaagtattcctgtgaactcacactggatccaaacacagcaaacagaaaactc
aagctgtctgacaacaacaggaaggtgacacatgtggagatggttcagtcatatcctgat
catccagacagatttgatcaccggcctcagctgctgtgtagaaatgatctgactgatcgc
tgttactgggaggtcgagtggagaggaacagtttatatttcagtgacttacagaggaatc
agaaggaaaggagacagtgatgacagcaggttaggatggaatgatcagtcctggagtgtg
aggtgctctgatggtggttactctttctggcacaacaacagtggaacgtccccctcctcc
tcctcttcctctgcctctggtagagtagcagtgtatgtggactgtcctgctggcactctg
tccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccacattc
actgaacctctgtatgctgggtttgggtttcggtcacaagacaagtccggttcctcagtg
tctctgtgtcgtctgtag
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