Scomber japonicus (chub mackerel): 128355773
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Entry
128355773 CDS
T09718
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128355773 (arhgef10la)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128355773 (arhgef10la)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128355773 (arhgef10la)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128355773 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
SOS1_NGEF_PH
Beta-prop_RSE1_2nd
CFAP43_N
IQ_SEC7_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
128355773
NCBI-ProteinID:
XP_053172090
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All DBs
Position
3:complement(29467521..29585056)
Genome browser
AA seq
1262 aa
AA seq
DB search
MSTVITQHPPKEDEEEEDEEQGEEFVFEDSTDEEKLQEDSKGVSPEYAKPVQMSKKEDSG
TSDSVSQTVTDSTQQLSKPLPPAGQEESPTKDVTPTTDVPVSESPSWASTPADPSIPAPR
VGEELPRLPVAPSAVEVRADSGDNSKETVKESSGSRDISEAVRAPEAESQAAEVLEVIYD
DVPSEDPLSPDDADIYEDVQRDIAPVNADNGWSSSEFESYDEQSDNESKQPTRSKVQQLM
KAARSGTKDGLEKTKIAVMRKVSFLQRKDTLEEEDDAGYLDVAVSEVKHPPPQLSPMPEG
LTSHQVVRRHILGSIIQSERSYLESLRRILQEYHRPLMEADPRILSPRKIRPIFYRIREI
TQCHSMFQIALASRVAEWDTSEKIGDLFVASFSKSMVLDVYSEYVNNFTNAMALIKKACM
SKPAFLEFLKKKQASSVDRITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPLQLA
LTELEMLAEKLNEQKRVADQIAETQQLARTVSDRLLSKQLNSEQGSLVLCETLIETVYGE
RGQVLKSKERKVFLFDDVLICANINVKGPPDISSLVPVGPKYTMKWSAPLQQVQVVEVGQ
EGAQNKDTIFQQSGAKRQGGACASGKAILGPPRLYQELQELQHDLSVVEEVTLLVGTLQG
QYQNLNTTVAQDWCLALQRLIRIKEEQIQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTP
NPLSKISWVNRLHLAKIAQREENSPGWLYGEDEGKTMAPFLCPLLASHMPVFAAKSPERK
LEAALHNPVHCALLGFSAASTSLPQGYLWVAGGGEGSQGQIEIFSLNRPMPRAVKSLQIG
SAVRCLEYVPEPSPTEDVETGIQKAPSGMGANICVGLDNGRILVYGSVDTAAQCLLTLHN
PEGCPVLCLKHSSRFLFAGLRNGNMMVYGRNNNDDLWDPDSCRCVNLGSEPVRMLLVLDD
SVWASCGNYVTVMDISSLKTQKFEVHPDPMVSVAHMARAGGGVWMAFSEGSSIRLFHTET
LELLQEINISTRSTLLNTGQKNIRVTSLLICQGLLWVGTAQGLIITLPVPKLEGIPKITG
KGMVSLNAHYGSVDFLVATTSTLSPELLKRDSIADGPDSACGGEDRSDTSSQESLQHSSS
YQGEARGKGRGVLLQYKLRSTSGLPGRPLTALGDEASDSSLESLEHSVEDGSIYELSDDP
EMWVRGRPSERDGGRRDRVISAAVISGGKGFRRLKEGAPAGTRTSGEALENILMVWQLPL
TV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgtgataactcagcatccgccaaaggaggatgaagaggaggaggatgaggag
caaggggaagaatttgtgtttgaggacagcacagatgaggagaaacttcaggaggacagt
aaaggggtcagccctgaatatgcaaaacctgtccagatgtcaaaaaaggaagacagtggg
acatcagacagtgtatcacaaacagtcacagacagcacacaacaactttccaaacctttg
cctcctgctggacaagaggaaagtcccaccaaggatgtaactcccactacagatgttcca
gttagtgagtcacccagctgggcctcaacaccagccgatcccagtatcccagctccacgt
gtgggagaggaacttccgaggcttcctgtggcaccatcagctgtggaggtgcgggctgat
tctggagacaacagcaaggaaaccgttaaggaaagctctggctcgagggacatctctgaa
gcggtacgtgcgcctgaagctgagtcgcaggcggcggaggttttagaggtgatctatgat
gatgttccaagtgaggaccccctctctcctgatgacgcagatatctatgaagatgttcag
agggacattgctcctgtgaacgcagacaatgggtggagctccagcgagtttgagagctat
gacgagcagtctgataacgagagcaaacaaccaacacggagcaaggttcaacagctcatg
aaggcggcgaggagcgggacgaaggatgggcttgaaaagaccaaaatagccgtcatgcgg
aaagtttccttccttcaaagaaaggatacattagaagaggaggatgatgcaggatacctg
gacgtagctgtgtcagaagtgaagcaccctcccccacagttgagccccatgccagaaggg
ctgaccagccaccaggttgtcagacgccatatccttggctccatcattcagagtgagcgc
agctacctggagtctctcaggaggatcctgcaggaataccacagaccgctgatggaagct
gatcctcgcatcctgagtccacggaagatccggcctatattttaccgaatcagggagatt
acacagtgccactccatgtttcagattgcactggcatcacgtgtggctgagtgggacacc
agtgagaaaattggagacttatttgttgcttcgttttccaagtccatggtgctggatgta
tacagtgagtacgtgaacaacttcaccaacgccatggctctcattaaaaaggcatgcatg
tccaaaccggcttttttggagtttttaaagaagaagcaggcatccagtgttgaccggatc
actctgtacggcctcatggttaagcccattcaacgattccctcagtttatattgctcctg
caggatatgcttaagaatacaccaaagggccacgtggatcgtctgcccctgcagcttgct
ctgacagagctggagatgctggcagagaagctgaatgaacagaaaagagtagctgaccag
attgcagagactcaacaactagcccgcaccgtcagtgatcgcctgctcagtaagcaactg
aactcggagcaggggtcactggtcctttgtgagacgcttatagagactgtgtacggcgag
cggggacaagtcctgaagtcgaaggagagaaaggtcttcctctttgatgatgtactcatc
tgtgccaacataaatgtcaaggggcctccagacatcagcagcctggtccctgtcggccca
aaatacacaatgaagtggagcgcccccttgcagcaggtgcaagtagtagaagtcggacag
gagggcgctcaaaacaaagacaccatcttccaacagagcggggccaaacggcagggtggt
gcttgtgcttcaggtaaagcaatcctggggcctccacgtctctaccaggagctgcaggaa
ctacaacatgacctttctgttgtggaggaggtcactctcctcgtgggcacgctgcaggga
caataccagaacctgaacaccaccgtggcacaggactggtgtctggctctgcagaggctt
attcgcatcaaagaagaacagatccagagtgctaacaaatgtcgcttacgcctgcaggtg
cccggcaggccagacaagtcaggccgtcctgtcagtttcatggtggtcttcaacactccc
aacccccttagtaagatctcctgggtcaaccgtctgcaccttgccaagattgcacaacga
gaggagaattcaccaggttggttatatggagaggatgaagggaagaccatggctccattt
ttgtgtccgctgcttgcctctcacatgcccgtctttgctgcaaagtcaccagagagaaag
cttgaagctgccctccacaatcctgtccactgtgcattgttgggtttctctgcagcaagc
acctctttacctcaaggctatctctgggtggctggtggaggagaaggctctcagggccag
atagagatattttccctcaacaggcccatgccaagggctgtgaagagcttgcaaataggc
tctgcggtccgatgtctggaatatgtgccagaaccttctccgactgaggacgtggagact
ggaattcagaaggccccctcggggatgggagccaacatttgtgttggattagacaatgga
cgcattctggtctacggcagtgtggacactgcagcacagtgcctattgacccttcataac
ccagagggctgccctgtgctgtgcctgaagcactcctctcgcttcctgtttgcaggcctg
cggaacgggaacatgatggtttatggaagaaacaacaatgatgatctttgggaccctgat
tcctgcagatgtgtaaatctgggttcagaaccagtacggatgttgttggtgctggatgac
tcagtgtgggcaagctgcgggaactacgtcacagtcatggacatctccagcctcaagact
cagaagtttgaagttcatccagacccaatggtcagcgtcgcacacatggcacgcgccggt
ggaggggtgtggatggcgttctccgagggttcctccattcgtctctttcatactgaaaca
ctggagcttctgcaggaaatcaatatctccacacgctcaacactgctgaacactggtcaa
aagaacatacgagtcacaagtctcctaatttgccaggggttgctatgggttggtactgcc
caaggcttaattatcactcttccagtccccaaactggagggcatccccaaaataacagga
aagggaatggtctctctaaatgcccactatggctctgtggacttcctggtagccaccacc
agcaccctctctccagaacttctgaagagggattccatcgctgatggcccagactctgcc
tgtggaggtgaagaccgcagtgacacctcctctcaggaatccctacaacactccagttcc
taccagggagaggcgagaggcaaaggacgtggtgttctgctgcaatacaagctgcgctcc
acatcagggctgcctgggcggcctttaacagcactgggcgatgaggcgtcagactcctcc
ctggagtctttggaacacagtgtggaagatggatctatatatgagctcagtgatgaccca
gaaatgtgggttcgggggcgtccttctgagagggacgggggacgcagagacagggtgatt
tctgcagctgttatctctggaggcaaaggcttccgtagactgaaagaaggtgcaccagca
ggtactaggacaagtggggaggctttagagaatattctaatggtatggcagctcccactg
acagtgtga
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