Scomber japonicus (chub mackerel): 128355841
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Entry
128355841 CDS
T09718
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128355841 (msx1a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128355841 (msx1a)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
128355841
NCBI-ProteinID:
XP_053172182
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Position
3:13707738..13708827
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AA seq
283 aa
AA seq
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MAPSIAMSALTAALKTEDLPSRSVLVSRGEKQTSLSPAEETGKPKVAILPFSVEALMADR
KPSREVHSPDAPSVAGTSQVLGKGVRMGSFGSLDTSVPAMPMSSSFSVGELMNMPEDVLI
KPESPDSQERTSWIQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFR
QKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGI
SFPLGAHVPASYAGSHPFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgatcgccatgtcagctttgaccgctgctttgaaaaccgaagatctcccc
tcccgctcggtcctcgtcagcagaggcgagaagcagacgagcctgagcccagcggaggag
actggaaagcccaaagtggctattctgccattcagtgtggaggcactgatggcagatagg
aaaccgagcagagaggtgcattccccggatgccccgtcggtcgccgggacgtcccaagtg
cttggaaagggcgtacggatgggctctttcggtagtctggatacttccgttcctgctatg
cccatgagctcttcgttttcagtaggcgagcttatgaacatgccagaagacgtgttgatt
aaacctgagagcccggatagtcaagagaggacttcatggatacaaagccctcgattttct
cccacacctccacgacggttgagtcctcctgcttgtccactgcgaaaacacaagacgaac
agaaaaccccggacccccttcacgacgtcccagttactggccttggagagaaagttccgt
cagaaacagtacctttccatcgccgagcgcgcagagttctccagttccctcaacttgacg
gagacccaggtgaaaatctggtttcaaaacaggagagccaaagccaagcgactgcaggag
gcagaacttgaaaaactgaaaatggcagctaagcctatgctgcctccagctttcgggatt
tcctttcctctcggtgctcacgtccccgcatcctatgctggctcgcacccgttccagagg
cactcgctgccggtttccccagtgggactgtacgccgcccacgtcggatacagtatgtac
cacctggcttga
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