Scomber japonicus (chub mackerel): 128355854
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Entry
128355854 CDS
T09718
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128355854 (shq1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
128355854 (shq1)
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
RRN3
Motif
Other DBs
NCBI-GeneID:
128355854
NCBI-ProteinID:
XP_053172197
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Position
3:8908255..8944887
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AA seq
624 aa
AA seq
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MITPAFDLSQDAEYLILSIRVPYTRTSEFDLFIDGTDFKFYAKPYFLRLTLPGRIVEDGR
EKAVFDIDKGLFTLRVPKETAGEHFEGLQMLTSLLAPKGARSAKPLVEEISTDGGEGVGD
DEEEDDEEFDWQVEQEVYTESSEEELRALQKYGFGNQRSGVFARLQEELSEVIDVKNPEG
TTVAERRQARLEAETSAFSPDHYLADLFEDDEIQRLLKFKPWWAKLSPSTDQEGEAAISF
TDDEKEQLRKFTNRSYLLDKASRHQAWLGLTDILLAYSYETRSTEGEHNVESPWTIRKLS
GTLCWLETYNSLQEVLVSFGRRVLCYPLYRHFAMVSAAVRDTAVILQSGKACVLKCLLDI
HRVFRQNDPAYILNDLYITDYCIWIQRVKSKKVTDLGATLKKASLLKKDLELELEELEEA
ATMVVEEQEEQEQEERQGAYRSAPIPGGDSSSYSSDSSSSSSSDSSDESEESDAEGQGCT
DSKKGGGGETFKDNPLQQHPTSTTAAAASPSPIPQEPTVTFLSAGSKVEALPSASESSRQ
LIQELGERVAEEMRISQDLHSSRKAEGNCSQLSGGAAETEGTSAMSSSSSSGTLLEPSPR
RNPLLIVQTQEDPDESIFICGNGT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgataactcctgcatttgacctgagccaagatgctgagtacttgatcctcagcatccgt
gtgccctacaccagaacatcagagtttgacctttttattgacggcacagatttcaagttt
tatgcgaaaccctactttcttagattaactctccctggaaggatagtggaagatggaaga
gaaaaggctgtatttgacattgataaaggtcttttcactcttcgggtccctaaggagaca
gctggagagcacttcgaaggcctccagatgctgacgagtctccttgctcccaaaggagcc
cgttcagcaaaaccactggttgaagaaatcagcacagatggcggcgaaggtgtgggagat
gatgaggaggaagacgatgaagaatttgactggcaggttgagcaggaggtgtacacggag
agctctgaagaggagctgagagccctgcagaaatacggctttggcaatcagagatctgga
gtgtttgccagattacaggaggagctcagtgaagtgattgatgtcaagaacccagaagga
acaacggtagcagagaggaggcaggcccggttggaagcagagacatcagccttctctcct
gaccattacctggctgatttgtttgaggacgatgagatacagaggctgctgaagtttaaa
ccgtggtgggcgaagctgagtccttctacagaccaggaaggagaagctgctatatcgttc
accgacgacgagaaggagcagctgagaaaattcaccaaccgctcctacctgctggacaag
gcgtcccgtcaccaagcgtggctcggcctgacggacatcctgctggcttattcctacgaa
acgcgctcgacggagggagagcacaatgtggagtctccatggactatcagaaaactcagc
gggactctctgctggctcgagacatacaactccttacaagaggtcctggtgtcatttgga
cggagggttttatgctacccactctacagacactttgccatggtctctgcggctgttcgt
gacacagctgtgatcctgcagtcagggaaagcctgcgtcctcaaatgcctgctggatatt
cacagagtcttccgacagaacgacccagcctacatactgaacgacctgtacatcacagac
tactgcatctggatccagagggtcaagtccaagaaggtgacagacttgggcgccacatta
aaaaaagcctccctgctgaaaaaagacttggagctggagctagaggagctagaggaagca
gcgacaatggtggttgaggagcaagaggagcaagagcaagaggagaggcagggagcttac
aggagcgctccaatacccggcggtgacagcagcagctattccagtgacagcagcagcagc
agcagcagtgactcgtctgatgaaagcgaggaatctgatgctgaagggcagggctgcacc
gactccaaaaaaggaggaggaggagagacgtttaaggacaaccctctccagcagcacccc
accagcaccaccgctgctgctgcttctccttctcccatcccccaggagcccacagtcaca
ttcctgtcagcggggagtaaagtggaagccctcccctcagcctcggaaagctccagacag
ctgatccaagagctgggggaacgggtggcagaggagatgagaatctcccaagacttgcat
tccagccgtaaagcagaggggaactgttcacagctgagcggcggcgcagcagagactgaa
ggaacatcagcgatgagcagcagcagcagcagtgggactttattagagccgagccctcgc
aggaaccctctactcatcgtccagacacaggaagatccagatgagagtatcttcatctgt
ggaaatggaacttaa
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