KEGG   Scomber japonicus (chub mackerel): 128355854
Entry
128355854         CDS       T09718                                 
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog isoform X1
  KO
K14764  protein SHQ1
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sjo03009]
    128355854 (shq1)
Ribosome biogenesis [BR:sjo03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    128355854 (shq1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS RRN3
Other DBs
NCBI-GeneID: 128355854
NCBI-ProteinID: XP_053172197
LinkDB
Position
3:8908255..8944887
AA seq 624 aa
MITPAFDLSQDAEYLILSIRVPYTRTSEFDLFIDGTDFKFYAKPYFLRLTLPGRIVEDGR
EKAVFDIDKGLFTLRVPKETAGEHFEGLQMLTSLLAPKGARSAKPLVEEISTDGGEGVGD
DEEEDDEEFDWQVEQEVYTESSEEELRALQKYGFGNQRSGVFARLQEELSEVIDVKNPEG
TTVAERRQARLEAETSAFSPDHYLADLFEDDEIQRLLKFKPWWAKLSPSTDQEGEAAISF
TDDEKEQLRKFTNRSYLLDKASRHQAWLGLTDILLAYSYETRSTEGEHNVESPWTIRKLS
GTLCWLETYNSLQEVLVSFGRRVLCYPLYRHFAMVSAAVRDTAVILQSGKACVLKCLLDI
HRVFRQNDPAYILNDLYITDYCIWIQRVKSKKVTDLGATLKKASLLKKDLELELEELEEA
ATMVVEEQEEQEQEERQGAYRSAPIPGGDSSSYSSDSSSSSSSDSSDESEESDAEGQGCT
DSKKGGGGETFKDNPLQQHPTSTTAAAASPSPIPQEPTVTFLSAGSKVEALPSASESSRQ
LIQELGERVAEEMRISQDLHSSRKAEGNCSQLSGGAAETEGTSAMSSSSSSGTLLEPSPR
RNPLLIVQTQEDPDESIFICGNGT
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgataactcctgcatttgacctgagccaagatgctgagtacttgatcctcagcatccgt
gtgccctacaccagaacatcagagtttgacctttttattgacggcacagatttcaagttt
tatgcgaaaccctactttcttagattaactctccctggaaggatagtggaagatggaaga
gaaaaggctgtatttgacattgataaaggtcttttcactcttcgggtccctaaggagaca
gctggagagcacttcgaaggcctccagatgctgacgagtctccttgctcccaaaggagcc
cgttcagcaaaaccactggttgaagaaatcagcacagatggcggcgaaggtgtgggagat
gatgaggaggaagacgatgaagaatttgactggcaggttgagcaggaggtgtacacggag
agctctgaagaggagctgagagccctgcagaaatacggctttggcaatcagagatctgga
gtgtttgccagattacaggaggagctcagtgaagtgattgatgtcaagaacccagaagga
acaacggtagcagagaggaggcaggcccggttggaagcagagacatcagccttctctcct
gaccattacctggctgatttgtttgaggacgatgagatacagaggctgctgaagtttaaa
ccgtggtgggcgaagctgagtccttctacagaccaggaaggagaagctgctatatcgttc
accgacgacgagaaggagcagctgagaaaattcaccaaccgctcctacctgctggacaag
gcgtcccgtcaccaagcgtggctcggcctgacggacatcctgctggcttattcctacgaa
acgcgctcgacggagggagagcacaatgtggagtctccatggactatcagaaaactcagc
gggactctctgctggctcgagacatacaactccttacaagaggtcctggtgtcatttgga
cggagggttttatgctacccactctacagacactttgccatggtctctgcggctgttcgt
gacacagctgtgatcctgcagtcagggaaagcctgcgtcctcaaatgcctgctggatatt
cacagagtcttccgacagaacgacccagcctacatactgaacgacctgtacatcacagac
tactgcatctggatccagagggtcaagtccaagaaggtgacagacttgggcgccacatta
aaaaaagcctccctgctgaaaaaagacttggagctggagctagaggagctagaggaagca
gcgacaatggtggttgaggagcaagaggagcaagagcaagaggagaggcagggagcttac
aggagcgctccaatacccggcggtgacagcagcagctattccagtgacagcagcagcagc
agcagcagtgactcgtctgatgaaagcgaggaatctgatgctgaagggcagggctgcacc
gactccaaaaaaggaggaggaggagagacgtttaaggacaaccctctccagcagcacccc
accagcaccaccgctgctgctgcttctccttctcccatcccccaggagcccacagtcaca
ttcctgtcagcggggagtaaagtggaagccctcccctcagcctcggaaagctccagacag
ctgatccaagagctgggggaacgggtggcagaggagatgagaatctcccaagacttgcat
tccagccgtaaagcagaggggaactgttcacagctgagcggcggcgcagcagagactgaa
ggaacatcagcgatgagcagcagcagcagcagtgggactttattagagccgagccctcgc
aggaaccctctactcatcgtccagacacaggaagatccagatgagagtatcttcatctgt
ggaaatggaacttaa

DBGET integrated database retrieval system