KEGG   Scomber japonicus (chub mackerel): 128355865
Entry
128355865         CDS       T09718                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04010  MAPK signaling pathway
sjo04020  Calcium signaling pathway
sjo04218  Cellular senescence
sjo04260  Cardiac muscle contraction
sjo04261  Adrenergic signaling in cardiomyocytes
sjo04270  Vascular smooth muscle contraction
sjo04530  Tight junction
sjo04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128355865 (cacna1da)
   04020 Calcium signaling pathway
    128355865 (cacna1da)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    128355865 (cacna1da)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128355865 (cacna1da)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    128355865 (cacna1da)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    128355865 (cacna1da)
   04261 Adrenergic signaling in cardiomyocytes
    128355865 (cacna1da)
   04270 Vascular smooth muscle contraction
    128355865 (cacna1da)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sjo04040]
    128355865 (cacna1da)
Ion channels [BR:sjo04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   128355865 (cacna1da)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ CAC1F_C GPHH PKD_channel FAM176 PFF1_TM
Other DBs
NCBI-GeneID: 128355865
NCBI-ProteinID: XP_053172215
LinkDB
Position
3:complement(19818259..19875810)
AA seq 2141 aa
MSANGPAPDPAPVAPEAPPASVPAPAPAPAPAPAAPPAPPAQPAPTSSTIPVGALAQKKR
QQYAKSKKQGSNANSRPPRALFCLNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAV
YVPFPEDDSNSINHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIV
VIGLFSVVLEVLTKDDKVDEGEGLEINPSMHGHGGKSGGFDVKALRAFRVLRPLRLVSGV
PSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFMPGSDAIAEEEP
APCAISGHGRQCPINGTECREGWQGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMN
DAMGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEED
LKGYLDWITQAEDIDPDNEDEADEESKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPAS
ETESVNTENPNGEDEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLV
IILVFLNTLTISSEHYDQPLWLTEVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNR
FDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKS
IASLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNA
VMYDGIMAYGGPSSTGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNSDEGDKK
GDKKDDDKDEKEEDEDIEETAAEEEDPEVPSGPRPVISDLVKKEKITPIPEGSAFFIFST
TNPFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFT
VEIVLKVLGYADYVFTSMFTFEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFG
IQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFAC
IGVQLFKGKFYRCTDEAKSSPEECKGTFILYKDGDVNQPTIHRRLWHNSEFNFDNVLMAM
MALFTVSTFEGWPSLLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFV
IVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIM
FVLIMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNT
FDALIVVGSVVDIAITEVNKLVEPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLS
RGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMVDGTHINRNNNFQT
FPQAVLLLFRCATGEAWQEIMLACMSGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLC
AFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRR
IQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANE
ELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAH
PSQNNTAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHL
MNGGHRRSNGHQTNATQRPLQVQPPPHYAHMEQPVGRLSRANAMSHPNHHHHHHHHHHRH
HNSYGKSPKSTNINLNNANVSSLPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQGQR
RRYYETYVRSRGGDGCHPTIRREEEFDEDRLSGEYYSGEEFYEDDSMLSGDRYQNSDTEY
ETPKGYHHPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELP
HQRTALPLHLMQHQVMAVAGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRV
DHPHRESVASSQVSVRKSSWYTDDPEYSQRTYSPVHLQVPPEYHNQYHQKRGSATSLVEA
VLISEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLNGGISPGVNGVNVFPLL
TPRDYELQDTTASYSDEEPETESRAPYEEDLADEMICITTL
NT seq 6426 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcccgccccagacccagcccccgtggccccagaagcccctcctgct
tcagtccctgcccctgctccggcaccagctccagctcctgcggcaccacccgctcctcct
gcccagcctgccccaacgtcctctaccatcccggtaggtgcgttggcacagaagaagcgg
cagcaatatgccaaaagcaagaaacagggcagtaacgccaacagcaggccaccgagggct
ctgttctgcctcaacctcaacaaccccatacgcagggcctgcatcagcctggtggagtgg
aagccatttgatatatttatattaattgctatttttgccaactgtatggccttagctgtc
tatgtccccttccctgaagatgattccaactccataaaccatgacctggaaacagttgag
tatgccttcctcatcattttcacaattgagacctttctgaagattatcgcttatggtttg
gtgatgcaccagaatgcgtacgtgagaaacggttggaacatgctggatttcgtcattgtc
gtcataggactcttcagtgttgtcttggaggttttgaccaaagatgataaggtggatgaa
ggcgaaggacttgaaatcaacccgtcgatgcacggccatgggggtaaatcaggtggattt
gatgttaaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagta
cccagtttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacatt
gccctactggtcttgtttgtcattatcatctatgccattatcggcctggagcttttcatc
ggtaaaatgcacgcgacctgctttatgcctggttcagatgcgatcgcagaggaggaacca
gctccatgtgcgatctcagggcacgggcgccaatgccccatcaatggcaccgagtgcagg
gaaggctggcaaggtcccaacggtggcatcaccaactttgacaacttcctatttgccatg
ctgacagtgtttcagtgtatcaccatggagggctggacagacgtgctgtactggatgaac
gatgctatgggccttgagcttccatgggtatactttgtcagtcttgtgatcttcggctcc
tttttcgttcttaacctggtgttgggtgtgttgagcggagagttctccaaggagagagag
aaggccaaagctcgtggagacttccagaagctgcgtgagaagcagcagctggaggaggat
ctgaagggttatctggactggatcactcaggcagaagacattgaccccgacaacgaggat
gaggccgatgaggagagcaaacgcaaccgggtgactttggctgaccttactgagaagaag
aaaggaaggtttgggtggttcagccagtcgtccgacactcatgcgagcgttccagccagc
gaaacagaatctgtgaacacagagaatccaaacggggaggatgaaaagaccccatgctgc
ggacctctgtgtcaaaaaatttcaaagtccaagttcagtcggcgctggcgccgctggaac
aggttttgccgcaggaagtgccggttggctgttaaatcggtgcctttctattggctggtc
atcatcctggtgttcttaaacaccctcaccatatcatcagagcactatgaccagcctctg
tggctgacagaagtgcaggatgtggccaacaaggtgctgctagccctgttcacgtgtgaa
atgttggtgaagatgtacagtcttgggctacaggcctattttgtttcactgttcaaccgc
tttgactgctttgtggtgtgcggaggaatcactgaaaccattctcgttgagctggaaatt
atgtctcccctcggtatctctgtgtttcgctgtgtccgcctgctgagaatcttcaaggtc
acacgtcactggcagtctctgagtaacttagtggcatctctgctcaactctatgaagtcc
attgcttccctgctgcttctgctcttcctcttcatcatcatcttctccctgctgggcatg
caagtgtttggtggaaagttcaactttgatgagacccagaccaagaggagtaccttcgac
aacttcccccaagccctactcactgtgtttcagattttgacaggagaagactggaacgct
gttatgtatgatgggatcatggcgtacggaggtccttcctccactgggatgatagtgtgc
ttttactttatcatcctcttcatctgcggaaactatatcctcctgaatgtcttcttggct
atcgccgtggacaacttggcagatgcagagtctctcaactcagatgagggagacaaaaaa
ggggacaaaaaggatgatgacaaagatgaaaaggaagaagatgaggacattgaggaaacg
gcagcagaggaggaagaccccgaagttccatcagggcctcgaccagtcatttctgatctg
gtaaagaaggagaagatcactcctatcccagaaggaagtgccttcttcatcttcagcacc
acgaacccgtttcgtgtgttttgccacaaactcatcaatcaccacatattcaccaatctc
atcctggtgttcatcatgctcagctctgtctcactcgctgctgaggatccaatccgaaac
ttctcagctcgcaatattatacttggttactttgactatgctttcacggctatctttact
gttgagatcgtgttgaaggtcctaggctatgcagattatgtcttcactagtatgtttaca
tttgagatcgtgttgaagatgacgacatacggagcttttctccataaaggagccttctgt
aggaattacttcaacctcctggacttgttagtggtgggggtttcccttgtctcctttggc
attcagtcctcggccatctcagtggtgaagattcttagggtccttcgtgttcttcgaccc
ttgagagccatcaacagagccaaagggctgaagcatgtggtgcagtgtgtgtttgtggcc
atcagaacaatcggtaacatcatgattgtcaccaccctgctccagttcatgttcgcctgt
ataggggtgcagctatttaagggaaaattctatcgctgcacagatgaggcaaagtccagc
ccagaagagtgcaagggcacgttcatcctgtataaggatggagatgtgaaccagccaacc
atccacagacgactgtggcacaacagtgaattcaacttcgataacgtcctgatggccatg
atggctctgttcactgtgtctacttttgaaggctggccttcgttgctatacaaggccatc
gactccaacagggagaacctcggtcccatttacaactaccgtgtggagatttccatcttt
ttcatcatctacatcatcatcattgctttctttatgatgaacatctttgtaggttttgtg
atcgtcacatttcaggaacaaggagagaaggagtacaaaaactgtgagctcgacaagaac
cagcgtcagtgtgtagagtacgctctaaaggcgcgtccgctgaggagatacatccccaag
aacccttaccagtacaagttctggtatgtggtgaactccactgggtttgagtacatcatg
tttgtgctcatcatgcttaacacgctctgcctggctgtacagcactacggccagtcggcg
ctctttaactatgtaatggacattctcaatatggtcttcactgctgtcttcactgtggaa
atggttctcaaactcatcgctttcaaacccaggcactatttcgctgatgcttggaacaca
tttgatgccttaattgttgtcggtagcgtcgtcgatattgctatcactgaagttaataaa
cttgtagagccaacggagactcctcaggtggatgagcaggggaacactgaggacagcgct
cgcatctccatcaccttctttcgtctttttcgagtcatgcggctggtcaagctcctaagc
agaggggaaggcattcgcacattgctttggactttcattaaatccttccaggctctgccg
tatgttgctcttttgatagccatgctgttcttcatctacgctgtcattggcatgcagatg
tttggaaaagttgcgatggtggatggcactcacataaaccgaaacaacaacttccagacc
ttccctcaggctgtgctgcttctcttcagatgtgccactggagaggcgtggcaagagatc
atgttggcctgtatgtcgggtaaactatgtgacccagagtctgactataaccccggcgag
gagatgacgtgtggcagcggatttgcaataatttacttcattaccttctacatgctctgc
gccttcctgattatcaatttgtttgtggccgtcatcatggacaactttgactatttgaca
cgtgattggtccattcttggtccacaccacctcgatgaattcaagagaatttggtcagaa
tacgacccagaggccaagggcagaattaagcatttggatgtcgtaactcttcttcgtcgt
atccagcctcctcttgggttcggcaaactgtgccctcacagagtggcctgcaagaggctg
gtagccatgaacatgcctctgaacagtgacggcacagtcatgtttaacgccactctgttt
gcactggtgcgaacagccctgaagataaaaacagaaggtaatctggagcaggccaatgaa
gagctgcgggctgtcattaagaaaatctggaagcgaaccagcatgaagctgctggatcaa
gtggtgccccctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctg
atacaggactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgcacat
ccctcccagaacaacacagctattgctctacaggctggtcttcgcacgctgcatgatatt
gggcccgaaattcgccgagcgatatcatgtgatctgcaagatgacgaactagtagacttt
ataccagaggaagacgaagaaatttataggcgtaatggcggactctttggtaaccatctc
atgaacggtggtcatcgacgatccaacggccatcagaccaacgctacgcagcggcctcta
caggtgcagccgccacctcactatgctcacatggagcagccagtaggacgcctgtctcga
gccaatgcaatgtcccaccccaaccaccatcatcaccaccaccatcaccaccaccgccac
cacaactcctacggcaagtctcctaaatccaccaatatcaacctcaacaatgccaacgtg
tccagtctgcccaacggaggacaccatcgctactatgaacatgcacctccaaatggctac
ccaggtcttcgcagctcctactacgactacgacaagccccggaccccacagggtcaaaga
aggcgctactatgagacctatgttaggtcccgtggaggggatggatgccaccccaccatc
cgcagggaggaggaatttgatgaagaccgcctgtctggggagtattacagcggagaggaa
ttttatgaagatgacagtatgctgtcaggggacaggtatcagaacagtgacacagagtat
gagactcccaaaggttaccatcaccctgacagttactacgacgacgatgagcagcctctg
taccgcgactcaaggaggtcaccaaagagacggttgcttcctgccacacctcaaggtcac
aggaggccatccttcaactttgagtgtctgcgcagacaaagtagccaggatgagcttcca
catcagcgtactgctctaccactgcaccttatgcagcaccaggttatggctgtagcaggc
ctggactccagcagagcccaccgcctctccccgacccgttccacccgctcctgggccact
ccccctgccaccccagccagtaaagaccagtcaccatactacacccctctcatccgtgtg
gaccacccacacagggagagtgtcgctagcagccaagtgtctgtgcgcaagagctcctgg
tatacagacgaccccgagtactcccagaggacgtactcaccggtccacctgcaggtgcca
cctgaataccataaccagtaccaccagaagagaggaagcgccaccagcttagtggaagcg
gttttgatatcagaagggcttgggagatatgccaaggatcccaagttcgtcgctgccaca
aagcacgagatagcagatgcatgtgagatgacaatagatgagatggagagcgcagccagc
cacctgctgaacggagggatttctccgggtgtcaacggggtcaacgtgttcccccttctg
actccaagagactatgaactgcaggacaccacagccagctacagtgatgaggagccggag
acagaatccagagctccatatgaggaggacctagcagacgagatgatctgcatcacgact
ttatag

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