Scomber japonicus (chub mackerel): 128355868
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Entry
128355868 CDS
T09718
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128355868
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128355868
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
CCDC84
DUF5365
Motif
Other DBs
NCBI-GeneID:
128355868
NCBI-ProteinID:
XP_053172220
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Position
3:17131988..17136036
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AA seq
428 aa
AA seq
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MERIPSAQPPPLSKHQADLSDVQGMDFPMYVYKPRRGMKRGEESKETYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSSLLEQQQQKILALQNGM
QIEQPPVSQEKSEEMFRSGFHMCAKEILQYLTSHETEGDFTPSHVINHLHKLAAEVLQSP
VRPRTPLSPPPEEIPAYHQHQPHKEMPTSLPPKPSEGYGRNCVPVIQRAYAPQSGEQSGS
DTDTDSGYGGELEKNESGVSQGRPDYYSQESQLKRALSERQGSSIKQEDDEPRHKRPRVE
SSEDEVLSGGESSTSPSSSGYGSYMSVSPNHPPPPHPLCMPFYLIPPSAAAYLPMLEKCW
YPGAVPMLYPGMGSTAPAMSSERPPPPQLVMSPRGGSPAPAISQTPMDSPALLQALKQVP
PLNLETKD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatcccaagcgcgcagccacctcctctgtccaaacaccaggctgatctatca
gacgtgcaggggatggatttcccgatgtatgtttataaacccaggcgaggaatgaagaga
ggagaagagagcaaggaaacctacaaactgcctcacagactgattgaaaagaaaaggcgt
gaccggataaacgagtgcatcgcccagctgaaagatttactgccagagcacctgaaactc
acgactcttggccatctggagaaggctgtggttttagagcttacgctcaagcatgtgaaa
gccctctcctctcttctggagcaacagcagcagaagatcctcgctctgcagaacggcatg
caaattgaacagcctcctgtcagtcaagagaagtcagaggagatgttccgctctggcttc
cacatgtgtgccaaggagatccttcaatatctaaccagtcatgagactgaaggagacttc
acaccatcccacgtgatcaatcaccttcacaagttagctgcagaggtgctgcaaagtccg
gtcagaccccgcactcctctcagtcctccacctgaggaaattcctgcctaccaccagcac
caacctcacaaggaaatgcccaccagcttaccccctaaacccagtgagggctatggtagg
aactgtgtgcctgtcattcagcgagcgtatgctccacagagtggcgagcagagtggcagt
gatacggatacagacagcggctatgggggagagttggagaagaatgagtcaggggtgtcg
cagggacgaccagattactacagtcaggagagccagctgaagcgagcactcagtgagagg
cagggctccagcatcaagcaggaggacgatgagccacgccacaaacgaccccgggtggag
tcatctgaggatgaggtgctctcgggtggagagtcatccacttcaccatcctcaagtggt
tatggtagttacatgagtgtatcccccaaccatccacctcctccacatcccctctgcatg
cctttctacctcattccaccctctgctgccgcctacctgccaatgctggagaaatgctgg
tacccaggagccgtgcctatgctgtaccccggcatgggaagcacagcacctgccatgtcc
agtgaaagaccgccaccacctcagctcgtgatgtctccaaggggaggctctccagcccca
gccatatcgcaaacccccatggactcccctgccctccttcaggcactaaaacaggtacca
cccctcaacctggaaaccaaagactga
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