Scomber japonicus (chub mackerel): 128355960
Help
Entry
128355960 CDS
T09718
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128355960 (bhlhe40)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128355960 (bhlhe40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF3334
Motif
Other DBs
NCBI-GeneID:
128355960
NCBI-ProteinID:
XP_053172323
LinkDB
All DBs
Position
3:complement(12373974..12377562)
Genome browser
AA seq
410 aa
AA seq
DB search
MERITSAQPPPCVPKHASLDIADMPGMEFPIYMYKPRRGMKRGDESKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSSHLEQQQQKIIALQK
DLQISDHGGDTAEANEEMFRSGFHLCAKEVLHYLANQESSRDLTPSHVITHIQKVAAEVL
HHQSSRVDESVLQSSEKVKKPAGPPPRTSEGPAKNCVPVIQRTYPHGMGEQSGSDTDTDS
GYGGEHDKRDPKAQWSESHAREGELKHAASDRTASAIKQEGDEPQAKKSRSDSSEDEILP
GHTAGGPGSYMSFSPNQPPFCLPFYLIPPAAAAAAAYLPMLEKCWYSGGMPVMYPSMSGS
AASLPPDTLPSSLVMSPRAGSPVPHQIPMDSPALHKALKQVPPLNLETKD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattaccagtgcgcaaccacctccctgtgtgccaaaacatgcgtctctggat
atagctgacatgcctggaatggagtttcccatttatatgtacaaacccaggaggggcatg
aagcgcggggatgagagcaaggagacgtacaagttgccccaccgactgatagaaaagaaa
agacgtgacagaatcaacgaatgcattgcccagctgaaggatttgttgccagaacatctt
aagcttacaacgctgggtcatttggagaaagccgtggtgcttgaactcactctcaagcat
gtgaaagccttgagttcccacctggagcagcagcagcagaaaattattgcgctacagaag
gacctgcaaattagtgatcatggtggtgacaccgcagaagccaacgaggagatgttccgc
tcaggctttcacctgtgtgcaaaagaggtcctccattatctggccaaccaagaaagcagc
agggacctgaccccttcccatgtcatcacccacatccaaaaggttgccgctgaagtcctg
catcatcaaagcagtcgagtagacgagtccgtccttcaaagttcagagaaagtgaagaaa
cctgccggaccacctccgagaacctccgaaggtccagctaagaactgcgttcccgtcatc
caaaggacttatcctcatggtatgggggagcagagcggcagtgatacggacactgacagc
gggtatgggggagaacatgacaagcgtgaccccaaagctcagtggtcagaaagccacgcc
agggagggggagctcaagcatgctgcatctgatcggacagccagtgccatcaagcaggag
ggtgatgagcctcaggccaagaagtcgaggtctgactcttcagaggatgaaatcctcccc
ggtcacacagcaggaggtcctggcagctacatgagtttctcccccaaccagcccccattt
tgcctacccttctacctcatcccacctgcagctgcagcagcggcagcatatctgcccatg
ctggagaaatgttggtattctgggggcatgccggtcatgtacccaagcatgagtggctct
gcagctagcttgcctccagacactctgccctcatctcttgtgatgtccccaagggcaggg
tcaccggttccccaccagatccccatggactcccctgctcttcacaaagctttaaagcag
gtccctccattgaacttggaaaccaaagactaa
DBGET
integrated database retrieval system
