Scomber japonicus (chub mackerel): 128355996
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Entry
128355996 CDS
T09718
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128355996 (ap5b1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128355996 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
128355996
NCBI-ProteinID:
XP_053172384
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All DBs
Position
3:6483288..6488837
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AA seq
952 aa
AA seq
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MAANWAERISAFSRSPSRFLSGTTAEAFLAELLRELRDDRASYSVKVLLLSPLCEHPTLL
CPSDSVGEETALDLMSVFAQCPSKSVQFHCNLLLAITSVLICTSCVSNRSRASQDFLDQL
LQLSQDTGDLQGDGALRSLRATACECLRELEACCPGLLSQRLELLGALRLKETSRIHQAY
AGLHTLVLRNAVYQLAQETGAGADHLKALLGGNTSVAWEAEQDSDLMNNKDSSILSSLIL
GPMGTIPTLQTGPDCKELRSVLSSLLEESYLLTPQCQAALLHRLIEVVAMVPGVPPAIFR
AQLLRLLGTSEVGLLHSTLLLKCAFTDSLFSAEDEAFILKRLVVLSQHPLLTTPEKLFYT
DCLLHFPENRPISCGDGDESLPVLLTPRLASALLPTVFNDSATMLSRFNLLCLVYLEEEE
EGEEEGKGLSYLYEHLTALLRIVENGGSREIVVTFFRAAFLFLLYFRHVERFSGGLTEKL
CELYLRHTRLAPHLINLANQTQERLSESTWAVGFLRALQRVITEAPLAKLTIQDLSRHLK
MLARVAEEGEIPQRSTLGFLSSVITASSSSLCVSGDWRLGNSVLGVCRRLLVHPTLDSLL
NPLADILQHLAGRYGDTDIQDHARLYYTLLTTLSKEKLAGVLAQGASEGGRQVTKRTLSC
IMAESEELTGVLTIHQTEKPIVKLVELDDSELREEKQTDRESDSSTDDTCPDEASAAVRT
YRARFHHPDFPSEIALRYRLTYTEDHDPRFDQLFSIRLHFNLTDDHYEELGDISVPCLFR
ERTPPVVKLRLKPRRPYPTVLHASAIFTTQDGLSWHTILPDVHVSFQQTFTPLPAPTTWG
TGGKLKVFEGLWDEICSESGEDGATSLFCCQLEEAALEALVEKHFLPYLISDPSHEEEEH
KVLFFLPPRSHMLLKIRREEDAVHFDIATDNWQLLPHASSLLLTVTSSQEDR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactgggccgagaggatctccgctttctcccgcagtccgtcccgcttcctc
tccgggacgacagcggaggctttcctggcagagctgctccgtgagctccgagatgacaga
gccagctacagcgtcaaggtcctcttgctgtctccgctctgtgagcacccgaccctgctg
tgtccctcagactctgtgggagaggagacggctctggatctcatgtcggtgttcgcccag
tgtccttccaaatccgtccagtttcattgcaatctcctcctggccatcacatctgtcctc
atctgcacatcctgtgtgagcaaccgctcccgtgcgtctcaagacttcctggaccagctc
ctccagttatcccaggacaccggggacctccagggtgatggagctcttcgctctcttcgg
gccacggcgtgcgaatgcctgcgggagctggaggcctgctgccccggtcttctctcacag
cgtctcgagctcttgggtgcgcttcgacttaaagaaacctccaggatccaccaggcctac
gcaggactccacactctggtgttaagaaacgctgtgtatcagctggcacaggaaacagga
gcaggtgcagatcatctcaaagctcttttgggaggaaatacatcggttgcatgggaagca
gagcaggactcagacctgatgaataacaaggactcatccatactgtcttccctcatcctg
ggccccatgggtacaatccccactctccagactggacctgactgcaaggagttacgctcg
gtcctgtcctccctgctggaggagtcctacctcctcactcctcagtgtcaagctgcgctg
ctacatagactgatagaggtggtcgccatggtgcccggtgtccctcctgccatattcaga
gctcagctgctgcgactgctgggcacgagtgaggtcggcctcctccacagcactctcctg
ttgaagtgcgcgttcaccgacagcctgttcagcgccgaggacgaagccttcatcctcaaa
cgtctggtcgtcctctcccagcaccctctgctcaccacgcccgagaagcttttctacacc
gactgcctcctgcactttcccgagaaccgacccatcagctgcggcgatggcgacgagtcc
ctccccgtgctgctcaccccgcgactggcctccgctctgctgcccaccgtgttcaacgac
agcgccaccatgctgtcccgcttcaacctgctgtgtctggtctacctggaagaggaggag
gaaggggaggaggaaggcaaggggttgtcctacctctacgaacacctcaccgcactgctc
cgcatcgtggagaacggcggcagcagagagatcgtcgtcaccttctttagagccgccttc
ctcttcctcctctacttccgccacgtggagcgcttctcgggaggcctgacggagaagctg
tgcgagctctacctccgacacacccgcctggcaccgcacctcatcaaccttgccaaccag
acccaggagaggctctcggagtccacctgggccgtcgggttccttcgggcgctgcagagg
gtcatcacagaggccccgctcgccaagctcaccattcaagacctcagccggcacctgaag
atgctggctcgagtggcggaggaaggagagatccctcagcgctccaccctcggcttcctc
tctagcgtcatcaccgcatcttcatcgtcgttgtgcgtgagcggcgattggcgcctaggg
aacagcgtgttgggggtttgtcggcgcctgctggttcacccgactcttgactccctactc
aaccctctcgccgacatcctccagcacctcgccggtcgctacggagacacggacatccag
gatcacgcccgactctactacaccctcctcaccactctgtctaaagagaagctggccggg
gttttggcgcagggagcgagcgaaggagggcggcaggtgacgaagaggactctgtcgtgc
atcatggcggagagcgaggagctgaccggcgtcctgacgatacaccagacggagaagcca
atagtcaagttggtggagttagacgattcggagctacgagaagaaaaacagacggatcgt
gaaagcgactcgagcaccgacgacacctgtccagatgaggcgagcgcagcagtgagaacc
tacagagctcggttccaccaccctgacttcccctctgagatcgccttacgctaccggctc
acctacaccgaagatcacgaccctcgattcgatcagctgttcagcatccgcctgcacttc
aacctcacggacgaccactacgaagagctcggcgacatcagcgtgccctgtctcttcaga
gagaggacgccgcccgtggtgaagctgaggctgaaaccaaggcggccttaccccactgtc
ctccatgccagcgccatcttcactacccaggacgggctttcttggcacacaatcctccca
gacgtgcacgtgtcgttccagcagaccttcacgccgctacccgctcccacaacttgggga
acgggcggcaaactgaaggtgttcgaaggactgtgggacgaaatctgctcagagagcggg
gaggacggcgccaccagcctgttttgctgccagctggaggaggcagcgctggaggccttg
gtggagaaacacttcctcccctatcttatatcagacccgtcccacgaagaagaagaacac
aaagtgcttttcttcctccccccacgctctcacatgctgctgaagatcaggcgcgaggag
gacgccgttcattttgacattgctacagataactggcagcttctgcctcacgctagctct
ttgctgttgaccgtcacgtcgtcgcaggaagaccgataa
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