Scomber japonicus (chub mackerel): 128356047
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Entry
128356047 CDS
T09718
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128356047
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Vision
Opsin
128356047
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
MpPF26
Motif
Other DBs
NCBI-GeneID:
128356047
NCBI-ProteinID:
XP_053172453
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Position
3:12006014..12007865
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AA seq
357 aa
AA seq
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MTEEWGKQAFAARRHYEDSTRGSAFVYTNSNHTKDPFEGPNYHIAPRWVYNVSTLWMLIV
VVLSVFTNGLVLVATAKFKKLRHPLNWILVNLAVADLGETVFASTISVCNQYFGYFILGH
PMCVFEGYTVSVCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWATGGIVFSWVWAAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSDDPGVQSYMIVLMITCCLIPLAIIILCYLAVW
MAIRAVALQQKESESTQKAEREVSRMVVVMILAYCLCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRTCIMQLFGKEVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagtggggaaaacaggcgtttgcagccaggcgacactatgaagactcaaca
aggggatctgcctttgtttacacaaacagcaatcatacaaaagatccctttgagggtccg
aattaccacattgctcctcgatgggtttacaacgtatcaacactctggatgctgattgtg
gtcgttctatcagtcttcactaacggtctcgtcttggtggcaacagcaaagttcaagaaa
ctccgtcaccctctgaactggatcttggtcaatcttgctgttgctgatcttggagagaca
gtttttgcaagcacaatcagtgtatgcaaccagtattttggttacttcattctaggacac
ccaatgtgcgtctttgagggctacactgtctcagtttgtggcattgctgctctctggtcc
ctgactatcatctcttgggagagatgggtcgttgtctgcaaaccttttggaaacgtcaag
tttgatgccaaatgggccacaggtggaattgtattttcctgggtctgggcagctgtatgg
tgtgctccccccatatttggatggagcaggtactggcctcacggactgaagacttcctgt
ggacctgatgtattcagtggaagtgatgaccctggtgtccagtcctacatgattgttctc
atgattacatgttgcttaattcccctggctatcatcatcctttgctaccttgccgtctgg
atggctatccgtgctgttgccttgcagcagaaggaatcagagtcaacccagaaagctgag
agagaagtatccagaatggtcgttgtcatgatcttggcatactgtttatgttggggacct
tacaccttttttgcctgctttgctgcggcaaaccctggatatgctttccatcctctggct
gctgccatgcctgcatactttgccaagagcgccaccatctacaacccaattatctatgtc
ttcatgaaccgccagttccgcacatgtatcatgcagctctttggcaaagaagttgatgat
ggctctgaagtatctacatcaaagacagaggtctcctctgtggctcctgcataa
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