KEGG   Scomber japonicus (chub mackerel): 128356095
Entry
128356095         CDS       T09718                                 
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
  KO
K06587  integrin alpha 11
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04510  Focal adhesion
sjo04512  ECM-receptor interaction
sjo04810  Regulation of actin cytoskeleton
sjo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128356095 (itga11a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128356095 (itga11a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128356095 (itga11a)
   04810 Regulation of actin cytoskeleton
    128356095 (itga11a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sjo04515]
    128356095 (itga11a)
Cell adhesion molecules [BR:sjo04515]
 Integrins
  Integrin alpha subunits
   128356095 (itga11a)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 LYRIC
Other DBs
NCBI-GeneID: 128356095
NCBI-ProteinID: XP_053172515
LinkDB
Position
1:30669448..30720662
AA seq 1190 aa
MEYYCFLLIVFSFLGFHDCFNIDTKRHRIIKGPKQAQFGYTVQQHVAAGGEKWLLVGAPY
EMNGPYQTGDVYKCSLSKRTNGNGCSKLNLGRISLTNVSERKDKMRLGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVLDGSNSIYPW
YEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKRARNINQRGGE
ETNTALGINVARSQAFKQGGRRGAKKVMIVITDGESHDSPDLQQAIEDSERDGITRYAIA
VLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALKDIVDALGERIFSLEGTSKN
GTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPPKSSYRLEFPEEL
KNHGAYLGYTVTSVVSARNGRLLVAGAPRFNHTGKVIIFTLKNSGNLTILHSLKGQQIGS
YYGSEIAPLDIDGDGVTDNLLVAAPMFFNGGLEKGKVYIYRVTELNRFILEGALEIHNGG
QNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRILRKYKQRIAAADL
APGLQYFGRSIHGVMDMNDDGLVDLAVGSLGAAVLLWSQSVIRIYTTVRFEPSKINIFVK
DCQRGGKDVTCMSAIVCFNITARTAILPTQEIGIKYNVSIVERRFKPRAIMDNPSKLQPQ
NLTILPGEQTCEHIYFHVMETTDYARPIVFAAQVGLQDPNQGPVLDESWPTVVRTELPFW
NGCDEDDRCIPELALQSMTDLMTRNQFCAQAVQSRSAFCRNLNEGEMEGSLRVLEGNRRR
MVVDVRLENKGENAYNTRLNITYTSNLRFSSLIVKDNSDIKIECYIEDKLRNEKICNVST
PFMRAKSQVSFRLEFEFSRTVFLEHVRIILEASSDGEEVSTTDNFNDIYYSLRYEGDLLF
TRDSNPTRYEIKSELSLEEPGIIGPPFNFTFQIQNLGYFPVKDLQLNIEIPEMTKNGNQL
LQISDFHIDQVNGTRCLPPQHVAQSRASPEDLSRFSRLNRSNTLTLPIQCTVNVASYRDI
AVRIRGALRIDTLHALKFKILELVISASVELPSSSRMFLHEERPVRHIVLEIRKEGDYRI
PTWIIVGSTLGGLLLLALLSLALWKLGFFRRQKRRDEDEQEANGKVAEER
NT seq 3573 nt   +upstreamnt  +downstreamnt
atggagtactactgcttccttctaattgtcttttcttttctaggattccatgactgcttc
aatatcgacacaaaaagacacaggatcatcaaaggtccgaaacaagcccagtttggatac
actgttcagcaacatgtggctgcggggggagaaaaatggttattagtgggggctccatat
gaaatgaatggtccttaccagacgggggatgtatataaatgttcactgagcaaacgaacc
aatggaaatggttgctccaagcttaacctaggaaggatatctctgaccaatgtatcagag
cggaaggacaagatgaggctgggaatgacgctcacatctaaccctaaagacaacagcttt
gtggcttgtgggccactatggtcctacgagtgtggcagctcttactacagcactggcata
tgctccagagtcaatgcaagcttcaagttctccagaacgattgcacccgcttttcaaaga
tgtgagacatacatggacatagtgattgttctggatggctcaaactccatctacccttgg
tatgaagtgcaggcttttctcattaacattcttcagaagttctacattggaccaggtcaa
atacaggttggagttgttcagtacggtgagaaggtggtccatgagttcaaactcagcgac
tacaagtcagttgaggaagtggtgaagagagcacgcaatatcaaccagcgtggaggagag
gagaccaacacagctcttggtataaacgtagcacgttcacaagcttttaaacaaggaggt
cggcgtggtgccaagaaagtgatgattgtgataactgacggagagtcacatgacagtcca
gatctccagcaagccatcgaggacagtgagagggatggcatcacccgttatgccattgct
gtcctcggctactacaaccgtagaggaatcaaccctgaggccttccttaatgaaatcaaa
tacattgccagcgacccagatgacaaacacttctttaatgtaacagatgagtcagcgctg
aaggatatcgtggatgcacttggagagcgcatcttcagtttggaaggaaccagtaagaat
gggacagcgtttggtctccagatgtctcaggctggattttccgcacacaacgtcgaggat
gggattctggtgggtgctgttggggcttatgattggaacggggcagtgctgaaggaaaca
cgccagggcaaggtggtccctcccaagtcttcctacagactggagttccctgaggagctc
aaaaaccatggtgcctacttgggttataccgtgacgtctgtggtgtcagccagaaacggc
cgtctacttgtagcaggagctccacgttttaaccacactgggaaagtcatcatcttcacc
ctgaagaactcgggcaacctcaccatacttcactccctcaaaggccagcagattggctcc
tactatggcagtgagattgcacctctggatattgatggagacggtgtgactgacaacctt
ttggtggcagctcccatgttcttcaatggaggcttggagaagggaaaggtctacatctac
agagtgacagagctgaatcgttttattcttgagggcgcgttggagatccataacggtggc
cagaacgctcgctttggttcatccctcgctcctgtcccggatttaaatggtgacggcttc
aatgacttggtcgtgggagcaccgctggaagacgatcacaaaggagccatatatgttttc
ttcagtcagcacaacagaatactgcgcaaatacaaacagaggatagcggcagcagacttg
gcccctggcctgcagtactttggccgtagtatccatggcgtgatggacatgaatgatgat
ggtttagtggacctggcagtaggttcccttggtgccgctgttctcctttggtcacagagt
gttatccggatatataccactgtccggtttgagcccagtaagatcaacatctttgtgaag
gactgtcagagaggtggcaaagacgtgacctgtatgtcagccatcgtatgtttcaacatc
actgccaggacagccattcttcccacacaggaaattgggatcaaatataatgtctccatt
gtggagcgacgtttcaaacctcgggccataatggacaacccaagcaagctgcagcctcaa
aacctgaccattcttcctggagaacaaacctgcgaacacatctacttccacgtcatggag
actacagactatgcaaggcccatagtgtttgctgcacaagtcgggctgcaggatccaaat
cagggaccagttctagatgaaagctggccaactgtcgtaagaactgagctgcccttttgg
aacggctgcgatgaggatgaccgctgtatacctgaactagcactgcaaagtatgactgac
ctgatgactcgaaatcagttttgtgcgcaggctgtacagtctcgaagtgctttctgccgc
aatttaaacgaaggagagatggagggatctctgcgggttttagagggaaacaggagaagg
atggtggtggacgtccgattggagaacaaaggagaaaatgcctacaacactcgcctcaat
atcacctacacaagcaatctacgcttctctagcctcattgtcaaggacaactcggacatc
aagatagagtgttacattgaagacaaactgagaaatgagaagatctgcaatgtcagcact
ccgtttatgagggccaaatctcaggtatcatttcgtctggagtttgagttcagccgtact
gtcttcttagagcacgtcaggatcatcctggaggccagcagtgatggcgaggaagtgagc
acaactgacaatttcaacgatatctattactcactgagatatgagggagaccttctattt
acgagggattcaaacccgactcggtatgagatcaaatcggaattgtcactggaggagccg
gggattatcggtcctcctttcaacttcacttttcagatccagaaccttggctactttcca
gtaaaggatctgcagctcaacattgagataccagaaatgacaaaaaatgggaaccagctc
ctgcagatatctgactttcatattgatcaggtgaacggtacacgctgtttacctccgcag
catgtggcacagagccgagcatcacctgaggacctgtcacgcttctctcgcttgaaccga
tccaacaccttaactctgccaatccagtgcactgtcaatgtggcttcctacagagatatt
gccgttagaatcagaggagctctacgaatagataccttacacgcactgaagtttaaaatc
ctggagctggtaatcagtgcatcggtggagctcccctcctccagccgcatgtttctacat
gaagagaggcctgtcagacatattgtattggagatcaggaaagagggagattacagaatc
ccgacctggattattgttggtagcacgctgggaggactcttattgttagccctgctcagt
ctggctctatggaagctcggcttcttccggagacagaagcggagagacgaagacgagcaa
gaggcaaacgggaaagtggcagaggagcggtaa

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