KEGG   Scomber japonicus (chub mackerel): 128356229
Entry
128356229         CDS       T09718                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03013  Nucleocytoplasmic transport
sjo04141  Protein processing in endoplasmic reticulum
sjo04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128356229 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128356229 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    128356229 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128356229 (sec13)
   04131 Membrane trafficking [BR:sjo04131]
    128356229 (sec13)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128356229 (sec13)
Membrane trafficking [BR:sjo04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    128356229 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    128356229 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    128356229 (sec13)
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 128356229
NCBI-ProteinID: XP_053172687
LinkDB
Position
3:complement(35184297..35191732)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGAWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDIKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWSAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQTEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttctgtcatcaacacggtggacacttctcatgaagatatgatccacgatgctcag
atggattactacgggacccgtctggccacctgctcctctgaccgcaccgtgaagatcttt
gacgtcaggaacggagggcagatactggtcgccgacctcagaggacacgagggtcccgtg
tggcaggtggcgtgggctcacccgatgttcggcaacattttggcttcctgttcctacgat
cgtaaagtcatcatctggaaggaagagaacggagcctgggacaagatgtacgaatacacc
ggacacgattcgtcagtgaactctgtgtgttggggtccgtatgacttcggtctgatcctg
gcctgtggaagctcagacggagccatttcccttctcacattcactggagatcagcagtgg
gacatcaagaagatcagcaacgcacacactatcggctgtaacgcagtgagttgggctccc
gctgtggttccaggcagcctgatcgatcagccgtcgggacagaagccaaactacgtcaaa
cgcttcgtctccggaggctgcgacaacctcgtcaaactctggaaagaggaggacggtcag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccttccatcggtcttcccaccagcaccatcgccagctgctctcaggacggacgcgtgttc
atctggacgtgtgacgaccctgcaggcaacacctggtcggccaaactgctccacaagttc
aacgacgtcgtctggcacgtcagctggtccatcactgggaacatactggctgtttctgga
ggagacaacaaggtgacgctgtggaaggagtcgatggacggtcagtgggcgtgtatcagc
gacgtcagcaagggccaaggagccgtctccaccatcacagacacacagcagactgagcag
tga

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