Scomber japonicus (chub mackerel): 128356229
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Entry
128356229 CDS
T09718
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
sjo04141
Protein processing in endoplasmic reticulum
sjo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128356229 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128356229 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128356229 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128356229 (sec13)
04131 Membrane trafficking [BR:
sjo04131
]
128356229 (sec13)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128356229 (sec13)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128356229 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128356229 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
128356229 (sec13)
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
128356229
NCBI-ProteinID:
XP_053172687
LinkDB
All DBs
Position
3:complement(35184297..35191732)
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AA seq
320 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWKEENGAWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDIKKISNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWSAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSTITDTQQTEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtcatcaacacggtggacacttctcatgaagatatgatccacgatgctcag
atggattactacgggacccgtctggccacctgctcctctgaccgcaccgtgaagatcttt
gacgtcaggaacggagggcagatactggtcgccgacctcagaggacacgagggtcccgtg
tggcaggtggcgtgggctcacccgatgttcggcaacattttggcttcctgttcctacgat
cgtaaagtcatcatctggaaggaagagaacggagcctgggacaagatgtacgaatacacc
ggacacgattcgtcagtgaactctgtgtgttggggtccgtatgacttcggtctgatcctg
gcctgtggaagctcagacggagccatttcccttctcacattcactggagatcagcagtgg
gacatcaagaagatcagcaacgcacacactatcggctgtaacgcagtgagttgggctccc
gctgtggttccaggcagcctgatcgatcagccgtcgggacagaagccaaactacgtcaaa
cgcttcgtctccggaggctgcgacaacctcgtcaaactctggaaagaggaggacggtcag
tggaaggaggatcagaagctggaggctcacagtgattgggtgagagacgtcggctgggct
ccttccatcggtcttcccaccagcaccatcgccagctgctctcaggacggacgcgtgttc
atctggacgtgtgacgaccctgcaggcaacacctggtcggccaaactgctccacaagttc
aacgacgtcgtctggcacgtcagctggtccatcactgggaacatactggctgtttctgga
ggagacaacaaggtgacgctgtggaaggagtcgatggacggtcagtgggcgtgtatcagc
gacgtcagcaagggccaaggagccgtctccaccatcacagacacacagcagactgagcag
tga
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