Scomber japonicus (chub mackerel): 128356275
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Entry
128356275 CDS
T09718
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128356275 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128356275 (snrpe)
03041 Spliceosome [BR:
sjo03041
]
128356275 (snrpe)
03032 DNA replication proteins [BR:
sjo03032
]
128356275 (snrpe)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128356275 (snrpe)
Spliceosome [BR:
sjo03041
]
Complex A
U1 snRNP components
Sm proteins
128356275 (snrpe)
U2 snRNP components
128356275 (snrpe)
Complex B
U1 snRNP components
128356275 (snrpe)
U4/U6.U5 tri-snRNP components
128356275 (snrpe)
Complex C
U2 snRNP components
128356275 (snrpe)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128356275 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
128356275
NCBI-ProteinID:
XP_053172740
LinkDB
All DBs
Position
3:7411706..7416926
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVSS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggtgcagaaggtgatggtgcagcccattaacctc
atcttcaggtatctacaaaatcgttcacggatccaggtgtggttgtatgaacaggtgaac
atgcggatagagggctgcatcattggttttgatgagtacatgaacctggttctagatgat
gctgaagaagtccacatgaagactaagaacaggaagccgcttgggaggatcatgttgaaa
ggagacaacattaccttgctgcagagcgtatccagctag
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