Scomber japonicus (chub mackerel): 128356802
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Entry
128356802 CDS
T09718
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128356802
04082 Neuroactive ligand signaling
128356802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128356802
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128356802
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
N4_RNAP_helical
Motif
Other DBs
NCBI-GeneID:
128356802
NCBI-ProteinID:
XP_053172904
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Position
4:complement(9058572..9075066)
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AA seq
641 aa
AA seq
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MDLYTIKCLSVLFFTLPPQVCSQTGPRAHAEERLLQDLFVHYNKLSRPVENTSDTVLVHF
GLSIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNPERYENVTSIRIPSEIIWRPDIVLY
NNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWTYDR
AKIDLISMASDVDQMDYWESGEWVIMNAVGKYNTKKYECCTEIYADITYYFIIRRLPLFY
TINLIIPCLLISCLTVLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLI
GEYLLFTMVFVTLSIIITVFVLNVHHRSPQTHCMPHWVRRVFLDLVPRVLFMKRPPGVAK
QHCKKLIEMMHGPTMISATSNSQAFWSGLETGLRQLGEIDNTFPKTPSDSPNIVVCSPSP
PSSPIEDLNEKDHLPKASIFCRSPTGLYSVLSEKQLHRGHNSSASSSSQLSLPPTLPLGP
IRSLSREEPNALASNGRSLSVEQMCDQKRELPQTTGHRCRSRSFQYCCFHNEGSGTTGIA
GRVKQAFTDHLAETLTAESSKDATTQQDPILPTISPAVQRAIEGVQYIADHLRAEDADFS
VKEDWKYVAMVIDRIFLWMFVLVCILGSVGLFLPPWLAGMI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggatctatacactataaagtgtttgagcgtacttttcttcactcttcctccacaagtt
tgttcccaaaccggaccccgggcccatgctgaagaaaggctgctccaggatctgtttgta
cattacaataagctctcccggccagtggaaaacacttccgacacagtcctagtacacttt
ggactctctattgcccagcttatagatgtggatgagaagaaccagatgatgactacaaac
gtctgggtcaagcaagaatggaacgattacaaactccgctggaacccagagcgatatgaa
aatgtcacctccatccgtattccctcagagatcatctggaggcccgacattgtcctctac
aacaatgctgatggcgactttgcagtaactcacctcacaaaggcacacctattctatgat
ggtcggataaaatggatgccaccagccatttacaagtcttcgtgcagcatagatgtcaca
tttttcccttttgaccagcaaagctgcaaaatgaaatttggttcatggacctatgaccgc
gccaagattgatctgatcagcatggccagcgatgtggatcagatggactattgggaaagt
ggcgagtgggtcattatgaatgcagtgggcaagtacaatactaaaaagtatgagtgctgc
actgagatatacgcggatataacttattatttcatcatccggaggcttccgttgttctac
accataaaccttatcatcccctgtctacttatctcctgtttgactgtactggtgttttat
ttaccatcacagtgtggagagaagatcactttgtgcatatcagtgttactgtccctaaca
gtattcctcctgctgatcacagagataataccatctacatcactggtcattccactgatt
ggcgaatacctgctttttaccatggtctttgtcacactctccatcataattactgttttt
gttttaaatgtacaccaccgatctccacaaacccattgcatgcctcactgggtgcggaga
gtattcttggacttggttcctcgagtcctgttcatgaagcgtccgccaggcgtagccaag
cagcactgcaaaaagcttatcgagatgatgcacggtccaaccatgatatcagcaacaagc
aactctcaggctttttggtcagggttagagactgggttgagacaattaggagagattgat
aatacatttccaaagactccatcagacagtccaaacattgtggtctgctccccttctccc
ccctcatctccaattgaggacctcaatgaaaaagatcatctaccgaaggccagcattttc
tgccggtccccaaccggtctgtattcagtcctctcagagaagcaactccaccggggtcac
aattcttcagcctcatcttcttcccaattgtccttgcccccaactttgccactgggcccc
attcgcagcctatccagggaagaaccaaatgcactggcctcaaatgggcgctccctcagt
gtagagcaaatgtgtgaccaaaagagggagcttcctcagacaactgggcatcggtgtcgc
tcccgcagcttccagtactgctgttttcacaatgaagggtctgggaccactgggattgca
gggcgagtgaaacaagcctttacagatcacctagcagaaaccctcacagcagagtccagt
aaagatgcgactacccagcaggaccccatacttccaactatttccccagctgtgcaacga
gccatagagggagtacaatacattgccgatcatctcagggcagaggatgcagacttttca
gtgaaggaggactggaagtatgtggctatggtcattgacaggatattcctctggatgttt
gtcctggtgtgcatactgggatctgttggactctttcttcctccttggctggctggaatg
atctaa
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