Scomber japonicus (chub mackerel): 128356815
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Entry
128356815 CDS
T09718
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128356815 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128356815 (lamb2)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
DUF2959
F5_F8_type_C
HTH_64
TPR_MLP1_2
Laminin_II
Motif
Other DBs
NCBI-GeneID:
128356815
NCBI-ProteinID:
XP_053172930
LinkDB
All DBs
Position
4:6517862..6571397
Genome browser
AA seq
1782 aa
AA seq
DB search
MQALLAMLVCVLAAAVGQVPDTSHGCAHGSCYPATGDLLVGREKNLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSDVFVQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFSHDCVSTFPGVSQGPLRN
INDVICESRYSDIEPSTEGEVIYRVLDPAIWIEDPYSPSIQNQLKITNLRVNFTKLHTLG
DNLLDPRPEIKEKYYYAIYELVVRGNCFCYGHASECAPIDGIKDDIEGMVHGRCVCNHNT
KGLNCEQCADFHNDMPWRPAEGRNTNACKKCNCNSHSSQCHFDMAVYLATGNVSGGVCDE
CQHNTMGRNCEMCKPFYYKDPIKDIRDPRVCIACDCDPDGSQNGGLCDSHTDPSLGMMGG
QCRCKANVEGPRCDKCRTGFFGLSADNPQGCQPCRCDHRGTVSGSSQCDPVSGDCFCKRL
VTGRSCDQCLTEHWALSHDLNGCRSCECDIGGALDNHCSMESGQCRCRSHMTGRQCTQVE
SGYFFMTMDYFLYEAELAKMGQGSMLEYREHQQGRPATWTGTGFARIPEGGTLEFHINNI
PYSMEYDLLIRYESQMPRDWEEVRITVIRPGPIPTSSPCGNTIPDDDRLIVSMPAGARFV
IPPQPVCLERGVTYTLRFEFTRYQDANSILNGAANALVLVDSIALMPRHSSMEMFNAGDL
ASNNRKQTYERYRCHEGPKSVTRPLMSDTCAKLITSMSAIINDGALSCNCDPQGSVSSMC
DVRGGQCRCRPNVIGRRCDQCAPGTYGFGPSGCIACGCSLEGSVTRLCDKFTGHCQCRPG
AFGQQCDRCQAGHWGFPSCRPCQCNGHADECDQRNGACIGCRDNTGGDKCDRCANGYYGN
PVLGIGQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGARCEECAPGYYGNP
SQQGGRCQPCQCNNNIDMSDTDACDRQKGECRKCLYNTEGPNCGICKSGYFGDASRRNCR
KCICNFLGTERSQCMEREECVCQRASGQCQCLPNVMGLTCDHCAPNHWNLASGKGCEACA
CDPNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDPSTQCRACDCDWRGIETSQCN
RLTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIVQDLAVRTKSLAERAH
EIQTTGLTGAYEKAFRDLEEKLAQARDIVNARNATVAAVATLMELIEDLRTQIGDTTDTL
NRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHRQLDILKNSNFLGAYDSIRSS
YNRSRDAERRANESTTTKPSTVSQSADTRRRTERLITVKKDDFNRKNAANKRALGDLNTR
AQGLDVKKINEKVCGAPGDVPCGESPCGGAGCRDDDGNRHCGGLNCNGAVAAADNALERA
KLADKELNKAMGEVEGLFTKVAEAKTKAEEAKGKAQAALDKATATKNKVERSNNDLRDLI
KQIREFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKERVSSLSSVDAILAKT
QDDVRKAEKLLLDAKRARHRSEGVKTTAETVKQALVDAKTAQTSAEKAIKRARNDIRETE
DRLVQIESETSNSEKNLNEAMDRLGTLGREINALKTKRANNSMAAARAEETATMARDKAK
EAKQILDGQLTDKYHEVQQRVDTKAKAVQDAKKRAESLRDEAKELLRDAQNKLQRLAELE
KNYEENQKKLEGKARQLDGLEGTMKDILNGINKQIQIYNTCQ
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgttactggcaatgctcgtctgcgtcctggctgctgcggtcggccaggtgcct
gacaccagccacggctgtgcccacggcagctgttacccagcaacaggagacttactggtc
ggacgagagaagaacctgaaggcctcgtccacatgtgggatgaggaggaaagagccttac
tgcattgtcagtcatctgcaggatgagaagaagtgtttcgactgtgactccaggcggccg
tacgaccccgtctacaacaccatcaatcaccggatagagaacgtgatcaccacattcaaa
ccacaccgcaagaagtcctggtggcagtccgagaatggaaagtcggatgtctttgtccaa
ctggatctggaagcagagtttcatttcactcacctgattatgaccttcaagacattccgt
ccagcagccatgctgattgagcggtcggcggatttcggtcgtacctggcagatctaccgc
tacttctcccacgactgtgttagtacctttccaggagtatcccagggtcctttacgaaac
attaatgatgtcatctgtgagtcacgctattctgacatcgaaccatctacagagggagag
gttatctacagagtgttggatccagccatctggattgaggatccatacagcccgagcatc
cagaaccagctaaagatcaccaacttgagggtaaacttcaccaaacttcacacgctggga
gacaacctgctagaccccagacctgaaatcaaagaaaaatattactacgccatctacgag
cttgtcgtacgtggaaactgcttctgctacggccacgcctccgagtgcgcccctatagac
ggcatcaaggatgatatagaaggaatggttcacggcaggtgtgtgtgtaaccataacacc
aagggtttgaactgcgagcaatgtgccgacttccacaacgacatgccctggaggccggcc
gagggacgcaacaccaacgcctgcaagaagtgtaactgtaacagccactcaagccagtgc
cactttgacatggcggtgtatttggccacgggtaacgtcagcggaggagtgtgtgatgag
tgtcagcacaacaccatgggacgcaactgtgagatgtgcaaacctttctattacaaagac
cccatcaaagatatcagggacccacgagtctgcatagcttgtgactgcgacccagacggc
tctcagaacggagggttgtgcgacagccacaccgacccttccctcggcatgatgggaggt
cagtgccgctgcaaggccaatgtggaaggtccacgctgcgacaagtgtaggaccggcttc
ttcggcctgagtgctgacaaccctcagggctgccagccctgccggtgtgaccatcgggga
acagtgtcaggtagctcccagtgtgaccctgtcagtggagactgcttctgcaagcgtctt
gtcactggacgcagctgtgaccagtgtctgacagaacactgggccctcagccatgatctg
aacggctgcagaagctgtgagtgtgatatcggaggagccctggacaaccactgctccatg
gagagcggccagtgtcgctgccgcagtcacatgacaggacgccagtgtacgcaggtggag
tctggatatttcttcatgactatggactacttcctttatgaggctgagttggccaaaatg
ggacagggttctatgttggagtacagggagcaccagcaaggtcgtccagcaacatggact
ggaactgggttcgcccggatacctgagggtggcaccttggagttccacatcaacaacatt
ccctactccatggaatatgacctgcttatccgctacgagtcacagatgccccgggactgg
gaggaggtgcgaatcacagtgatccgtcccggtccaattcctaccagcagcccctgtgga
aacaccatcccagacgacgatagactcattgtctccatgccggccggagccaggttcgtg
atccctcctcagcctgtgtgtttggagagaggtgtgacttacaccctccgctttgagttc
acccgataccaggacgccaacagcatcctgaatggagcggccaacgctctcgtccttgtg
gactctatcgccttgatgccacgccactcctccatggagatgttcaacgcaggggatctg
gcctccaacaacaggaagcagacctatgagcggtatcgctgccacgagggaccaaagagc
gtgacccgcccactgatgagtgacacctgtgctaagctaatcaccagcatgtcggccatc
atcaatgacggggccctgtcttgtaattgcgaccctcaggggtccgtcagctccatgtgt
gatgtccgtgggggccagtgtcgctgcaggccaaacgtgattggtcgacgttgtgaccag
tgtgctccgggaacttatggctttggaccatcaggctgcatagcctgcggttgcagtctg
gaaggttctgtgactcggctgtgtgacaagttcaccggtcactgtcagtgccgccccgga
gctttcggtcagcagtgcgacagatgtcaggcgggtcactggggcttccccagctgccga
ccctgccagtgtaacggacatgctgacgagtgcgaccagaggaacggagcctgcatcggc
tgcagggacaacaccggaggagacaagtgtgacagatgtgccaatggttactatggtaat
ccggttttgggcataggtcagtgtcgtccgtgcccctgtccggacgggcccaacagcgga
cgccactttgctgcatcttgttaccaagacaaccgtaaccgtcaaatcatctgcaactgt
aaccagggttacacaggcgccagatgtgaggaatgtgcccccggttactatggtaacccc
tctcagcagggagggcgctgccagccgtgccagtgcaacaacaatatagatatgtcagac
acggacgcatgcgacagacagaagggagagtgcaggaaatgcctctacaacaccgaaggc
cccaactgtggcatctgcaagagcggctatttcggggacgcatcccgacgcaattgcagg
aaatgtatatgtaacttcctgggcactgaacgcagtcagtgtatggaacgtgaggagtgt
gtgtgccagcgagcctcaggccagtgtcagtgtctaccaaacgttatgggtctgacatgt
gaccattgcgctcccaaccactggaacctggccagtggaaagggttgtgaagcctgcgcc
tgtgaccccaacaactctgtcacctcctcatgtaacgagtttacaggtcagtgtcagtgt
cgggatggatttggagggaagacctgcacagactgccaggagaactactggggagaccca
agcacacagtgcagagcttgtgactgtgactggcgtggcattgagacctctcagtgcaac
cggctgacaggccactgtgtttgccagcagggggtgtcaggtgtccgctgtgaccagtgt
gctagaggcttttctggccagttccccaactgccagccctgtcaccagtgctttggggac
tgggatcgcatagtgcaggacctggcagtgcgtaccaagtctctggctgagcgtgcccat
gagattcagaccactgggcttactggggcctatgagaaggctttcagggacctggaggag
aaactggcacaggctcgggacattgtcaacgcacgcaatgccactgttgcagccgttgct
actctgatggagcttattgaagatcttagaacacagattggtgacaccactgacaccttg
aaccgccttgaaggagacctgaccatcgtccaagacagcaactctgaggcaagcaaggag
ctcagcgctctggagagagaggccaaagaactaaacctcacttcagagcagctacatcgg
caactggatatcctaaaaaactccaacttcctaggtgcgtatgacagcatccgcagctcc
tacaacaggtctcgtgatgcggagcggcgagccaatgaatcaaccaccaccaagcccagc
accgtcagccaatccgcagacacccgccgccgcaccgagcgcctcatcaccgtcaagaaa
gacgactttaaccggaaaaatgcagctaacaagcgtgcgctgggagatctcaacaccaga
gcacagggcctggatgtgaagaagatcaatgaaaaggtttgcggtgctccaggcgatgtt
ccctgtggggagagtccgtgcgggggtgcaggttgtcgtgatgatgacggtaaccgtcac
tgtggaggtctgaactgtaatggtgccgtggcagctgctgacaacgccctggagagagcc
aaacttgcagacaaggagctgaacaaagcgatgggagaggtggagggactctttaccaag
gtggcagaggctaagaccaaggcagaggaggccaaaggtaaagctcaggcagctctggac
aaagccacagccaccaagaacaaagtggagcgctccaacaacgacctgagagacctcatc
aaacagatcagagaattcctcactcaggagggcgcagaccccgacagtattgaggcagta
gccaaccgcgtgttggagctctccatccctgcttcacctcttcagatcagacatcttgct
gatgaaatcaaagagcgggttagcagcctttccagtgtggatgccatcttggcgaagacg
caggatgatgtccgcaaggcagaaaagctgctgctggatgccaagagggcaaggcatcgt
tctgagggggtgaagaccacagcagagacagtgaaacaggccttggtggatgctaagact
gcacagacgtcagcagagaaggccataaaaagagccagaaatgacatacgggagactgag
gaccggctggtacagattgagtcagagacatcaaacagtgagaagaatctaaatgaggcc
atggaccgtctgggcacactgggacgggagatcaatgccctgaagaccaagcgtgcaaac
aacagcatggcagcagccagagccgaagagacagccaccatggcacgagacaaggcaaag
gaagccaagcagattctagacggccaactgacagataaataccatgaggtgcagcagcgg
gttgacaccaaggccaaagctgtacaggatgccaagaagagggccgagagcctcagagat
gaagcaaaggaactactaagagatgcccagaacaagctgcagagactagcagagctagag
aagaactatgaggagaaccagaagaagttggaggggaaagctcgtcagttggacggcttg
gagggaacgatgaaagacatcctcaacggcatcaacaaacaaatccagatctacaacacg
tgccagtaa
DBGET
integrated database retrieval system