Scomber japonicus (chub mackerel): 128356843
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Entry
128356843 CDS
T09718
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128356843 (ybx1)
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128356843 (ybx1)
03041 Spliceosome [BR:
sjo03041
]
128356843 (ybx1)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
128356843 (ybx1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128356843 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
128356843 (ybx1)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
General mRNP proteins
128356843 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
128356843
NCBI-ProteinID:
XP_053172976
LinkDB
All DBs
Position
4:13328668..13333420
Genome browser
AA seq
304 aa
AA seq
DB search
MSSEAETQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYAA
DRNRYRRYPRRRGPPRGGDYPENYQSDGEGEPGSGGRDKGSRDGGESAPEGDSQPPQRRP
AYPGRRRYPPYFGGEGDESQGGPDQGNKPVRQNYYRGFRPRFRPRGPPRPRPVRDGEEDK
ENQGGEGGQNQQPRQRRYRRNFNYRRRRPQTGGKPGPETKEAKTGGDPSAEKTSAPEAQQ
GGAE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacgcaacaaccaccgcagcctgctgccgatgcggagagccca
tccagcccggcagccgcagcttccgcgggggataagaaggtcatcgcaacaaaagtcttg
ggtacagtcaaatggttcaacgtcaggaatggatatggttttatcaacaggaatgataca
aaagaggacgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaatacctt
cgcagtgttggagatggagaaactgtggagtttgatgtagttgagggagaaaagggagca
gaggcagcaaatgtcactggcccaggaggcgttgcagtccagggaagtaagtacgccgct
gacagaaaccgctatcggcgttaccccagaaggaggggccctccccgtggtggagactat
ccagagaactaccagagtgacggagagggtgagccaggcagtggaggccgtgacaaaggc
agccgtgacgggggagagagcgcccctgaaggagactcacagccaccgcagcgcaggccc
gcttaccctggcagacggcgctacccgccatactttggaggtgagggtgatgagagccag
ggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttccgacca
aggttcagaccaagaggtccaccccgtcccagaccggtgcgggacggtgaggaggacaag
gagaatcagggcggcgaaggtggtcagaaccaacagccccgccagcggcgttaccgccgt
aacttcaactaccgccgcagacgcccacagactggtggcaaacccggcccagaaaccaag
gaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccagcag
ggtggggctgagtag
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integrated database retrieval system
