KEGG   Scomber japonicus (chub mackerel): 128356851
Entry
128356851         CDS       T09718                                 
Symbol
taf10
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128356851 (taf10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sjo03021]
    128356851 (taf10)
   03036 Chromosome and associated proteins [BR:sjo03036]
    128356851 (taf10)
Transcription machinery [BR:sjo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128356851 (taf10)
   Coactivators
    SAGA/TFTC/STAGA complex
     128356851 (taf10)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     128356851 (taf10)
    STAGA complex
     128356851 (taf10)
    TFTC complex
     128356851 (taf10)
    SAGA complex
     128356851 (taf10)
    SLIK complex
     128356851 (taf10)
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 128356851
NCBI-ProteinID: XP_053172988
LinkDB
Position
4:13306060..13310176
AA seq 186 aa
MNIDNANQSVTTGVASTTSSASSNCIANDNAATNVSSIPSVTTNASASAAMVTPSSDVSV
SNGVYVPGGITNGDVKPAISTTPLADFLLQLEEYTPTIPDAVTGYYLNRAGFEASDPRII
RLISLASQKFISDIANDALQYCKMKGTASGSSRSKTKDKKYTLTMEDLTPALSEYGVNVK
KPYYFT
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaatattgacaacgctaatcagtctgttactactggagtggcatctacgacgtcttca
gcttccagtaattgtatcgcaaatgataatgcagcaaccaatgtcagcagcatcccgtct
gtcaccactaatgcttcagcctcagctgccatggtgacaccatcatcagatgtatctgtc
tccaatggtgtttatgttcctggtggcatcactaatggagatgtaaagcctgctatatcc
accactcccctggctgatttcctcctgcagttggaagagtacactcccacaattcctgat
gcagttacaggatactacctcaaccgggctggctttgaagcttctgatccaagaataatc
cgtctgatctcccttgcgtctcagaagttcatttcagacattgctaatgatgcgctgcag
tactgtaaaatgaagggcactgcctcgggaagttcaaggagcaagacaaaggataagaag
tacactctgactatggaggacctgactcctgccctctcagaatatggtgtcaatgtcaag
aaaccatattacttcacatag

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