Scomber japonicus (chub mackerel): 128356868
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Entry
128356868 CDS
T09718
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128356868 (rtel1)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128356868 (rtel1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128356868 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
128356868
NCBI-ProteinID:
XP_053173015
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All DBs
Position
4:complement(910980..935746)
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AA seq
1178 aa
AA seq
DB search
MMHSLSLNGVTVNFPFPPYDCQKDYMQKVIECLQKRVNGVLESPTGTGKTLCLLCSTLAW
REHFKDTISARKIAQKLGGEEMFPDTPLSSWGTAATDGDKPAYYTDIPKIIYASRTHSQL
TQVVNELKNTSYRPKVCVLGSREQLCINPEVMRQESNHIKVHMCRAKVSTRSCVFYNNVD
EKSTDKELVNSILDMEDLVKFGNKQKACPYYLSRSMKTQADVIFMPYNYLLDPKSRRAHN
IELNGAVVIFDEAHNVEKTCEESTSFDLTPYDLASAISAVDKLLVEQAKEASSKDSVTPD
FNVESLNSGLKIEIDTIAKIKQILLDLEAAIDSYDVPSDKGITKPGIFIYELLERAHLTY
RSKTAVCEALDQITGYLAGQPGIFLNTSGLQKLNDIIQLVFCGEPSEKDRQQQMQANTIH
FKVHIHQDTSTNKKKQNTDVWAQSTSKKQGNILSYWCFSPGFSMQDLVNQGVRSIILTSG
TLSPLSSFTSEMRIKFPVCLENSHVIERDQIFVSVVERGPDGVYLSSAFDRRFVPENMSS
LGNTVANLSRVVPHGLLVFFSSFTLMDKNLEFWRANGHADRIENIKPIFVEPKGKSNFNE
VIDGYYNKVNDPASKGGSFFAVCRGKASEGLDFANTYGRGVIITGLPFPPKMDPRVILKM
QFLDEMNRKKNTEVKYLSGQEWYRQQAFRAVNQAIGRVIRHKDDYGAIFLCDQRFKSQSA
QANLPSWVRPYVRVYDGFGNIVRDVSQFFRVAQKMRPVVEKKAPPESCGTVCSSDTQSSG
FTTCSSSQSSRAQKAKVLDTHLPSLKRRRLNDITGAHGINKICIEYESEVHESQRRPVNL
LDALEQGDHRNGGEDDAAGEEKAHRLSTMSLQHDKRLDDELRGGKRKIKLVQEQKVSVSE
VVSEENKASKAKKFLAEMKKSLSQVNFERIVQALQTYKKNDDLDALLAETMVLAEDTNTH
SLLWGFYQFVRPHHKKRFDEKCQELTGRGCGYVPDHSLSKDEKKALMLHTAKDGQHSAVL
SSSSSSGASACNQLNTQQLNKGGHHLSHQGLRETQTGSASKNEVHSTFLADVRKTLGTER
SAQLFQAIRSYKTTDNYENLVTTVVSLLTEKEEDFNLLIRFGVFIRSHHKKQYKEILASL
TGQSLTDSDVAVSEDQQTGASSSSCLKTQSKISSFFSS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattcactgtccctgaatggagtgacggtgaatttccccttccctccgtatgac
tgtcagaaagactacatgcaaaaagtgattgaatgtcttcagaagagagtgaatggcgtt
ctggagagtcccacaggtactggtaaaaccctgtgcctgctgtgctccaccctggcctgg
agggagcacttcaaggacaccatctctgcccgcaagatagcacagaagctgggaggggag
gagatgttccctgacacccccctgtcttcctgggggacggctgctactgatggggacaag
ccagcctactacactgacattcccaagatcatatatgcatcgaggacacactcccagctc
acccaggtggtcaacgagttaaagaacacgtcatacagacctaaggtgtgtgtgttggga
tcaagagagcagctgtgtatcaacccagaagtgatgcgtcaggagagcaatcatatcaag
gtccacatgtgcagagccaaggtctccaccaggtcatgtgtcttctacaataatgttgac
gagaaaagcactgacaaagaactggtgaattctatcctggacatggaagatctggtcaag
ttcggcaataaacaaaaggcctgtccttactacctctctcgttccatgaaaactcaggca
gatgtgattttcatgccgtataactacctgctggatccaaagagccgcagggcacacaac
attgagctgaatggagctgtggttatctttgatgaggctcataacgtggagaagacgtgt
gaagagtcgacatcattcgacctcactccctatgatttagcctcagctattagtgctgtg
gacaaactgctggtggagcaggctaaagaagctagcagcaaagactctgtcactcccgac
ttcaacgtagaatctctcaactctggtttaaaaatagaaatagacactattgcaaaaatc
aagcagatactgctggatctggaagctgctatcgattcctatgatgttccaagtgacaaa
ggcatcacaaaacctggaatcttcatctatgagctgttagagagagcccacctgacctac
agaagtaagacggctgtctgtgaagctctggatcagatcactggatacttagcaggacag
ccaggaatattcctcaatacaagtggactgcagaagctgaatgatatcatacagctggtg
ttctgtggtgaaccatcagagaaggacagacagcagcagatgcaggccaacaccattcat
tttaaggttcatattcatcaagacaccagcactaacaagaaaaaacagaacacagatgta
tgggcgcaatccacatctaagaaacaaggcaacattctgagttactggtgcttctctcct
ggcttcagcatgcaagacctggtcaatcaaggtgtccgctctatcattctgaccagtgga
acgctgtctcctctgtcctccttcacctctgagatgaggataaaattcccagtgtgtctg
gagaacagtcacgtgatcgagcgggaccagatctttgtcagcgttgtggaacgaggtcca
gacggagtgtacttaagttcagcatttgatagaaggtttgttcctgaaaacatgtcatct
ttaggcaacactgttgccaacctgagccgtgtggtccctcatggtctcttagtgtttttc
tcctctttcaccttaatggataaaaacctggagttctggagagctaatggacacgcagat
cgcattgagaacataaagccaatatttgttgaacctaaaggaaagagcaactttaatgag
gtgattgatggttactacaacaaagtcaatgatccagcatctaaaggaggaagcttcttt
gctgtgtgtcgagggaaggctagtgaaggtctggattttgcaaacacttacggtcgtggt
gttattattactggcctccccttccccccgaagatggaccctcgagtcatcttgaaaatg
cagttcttggatgagatgaaccggaagaaaaacacggaagtaaagtacctgtctgggcag
gagtggtacagacagcaggcgttcagagctgttaaccaggccatcggcagagtcattcgc
cacaaggacgactatggagccatcttcctgtgtgatcagaggtttaaaagtcaatctgct
caagctaatctgccatcatgggtcaggccttacgtgcgtgtgtatgacggctttgggaac
atagtccgggatgtctctcagttcttcagggttgcacagaaaatgaggcctgtggtggag
aagaaggctcctccagagagctgtgggacagtgtgttcatcagacactcagtcctctggc
ttcaccacctgctcctcctctcaaagctcccgcgcacagaaggccaaagtgctggacacc
cacctccccagtctgaagaggaggagactcaatgatatcactggagctcacgggatcaac
aagatttgtattgagtatgagtctgaggtgcatgagagtcagaggagaccagtcaacctg
ctggatgctctggagcaaggtgaccatcgcaacggaggagaagatgatgctgcaggagag
gagaaggcccaccgtctgtccacaatgtctcttcagcatgataagaggctggatgatgag
ctccggggaggaaaacgaaaaatcaaattggtccaagaacagaaagtgagtgtgtcagag
gttgtctctgaggaaaataaagccagcaaggctaagaagttcctggcagagatgaagaag
tcactgagccaggtcaactttgagcgaatcgtccaggctctgcagacctacaagaagaat
gacgacctggatgctctgctggctgagacaatggtgctagctgaagacactaatacacat
agtctgctctggggtttctatcagtttgtacgaccacaccacaaaaaaaggtttgatgag
aagtgccaagagctgactgggagaggctgtggatacgtaccagatcactctctgtccaag
gatgagaagaaagcactgatgctgcacactgcaaaagatggacagcacagtgcggttcta
tcctcctccagttccagtggagcgtctgcctgcaatcagctgaacacgcagcagctcaat
aaaggaggacatcacctaagccatcaaggtctaagagaaactcagactggttctgcttca
aagaatgaagtccacagtacctttctggctgatgtgagaaaaaccctgggaacagaaaga
tcagctcagctgtttcaggccattcgtagctacaagacaacagacaactatgaaaacctg
gtgaccacagtggtgagcctactcactgagaaagaggaagacttcaaccttctcatcaga
tttggtgtgtttattcgctctcatcataagaagcagtacaaagagatattggcttctttg
acaggacagtctttgacagacagtgatgttgctgtgagtgaagaccagcaaacaggagct
tcatcgtcaagttgtttgaagacacaaagcaagatttccagttttttctcaagctga
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integrated database retrieval system
