Scomber japonicus (chub mackerel): 128356870
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Entry
128356870 CDS
T09718
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25
KO
K24799
TBC1 domain family member 25
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128356870 (tbc1d25)
Membrane trafficking [BR:
sjo04131
]
Others
Specific organelles associated proteins
Auto phagosome
128356870 (tbc1d25)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
128356870
NCBI-ProteinID:
XP_053173017
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All DBs
Position
4:1183850..1195925
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AA seq
857 aa
AA seq
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MAGEEERGVVRVKVKKCDGVLPVEFRSFAVDPQITSLEVLQHILIRAFDLNGRRNFGISY
LSRDRSGAEIYLGLLSDWDLDVAFVSAAKPYLQLKMDIKPSEDSPVMEDWDIISPKDVIG
SEQLLSDKTRSLASAALPLTQSFLSQVGRTLSKVQQVFSWSYGEEIKPFKPPLTDAEFHS
YLNGQGQLTRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLSGQERMDYMKRKTREYD
QLKSEWTARASQEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHP
QISYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSIKFQHLKLLLQY
SDPEFYSYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELL
GPPLESDETMAQCTDNDKTAENCLADDQEQKEKRRRHMLRPSREEPDASRITVTEEKEGQ
NISTGKESEGADCDIPQVTEKADLQAPPFERQTSFGEFKYYTARNEDSFDMEQQQGVVAS
KSVSSIPSRQSTMDSEDDPEERTPLIKNCENGFSPMSSPSLLPNGLPTWKTGSSTSSASP
SSWPGASPDSPPKSTTNGREALPRTVQEVLSSSAQVLSSTGINSPMTPTVKTSVASPSPT
QNRSLLSSPILSFGRGPSLPGSRASSNNLSSPGNKSPITTANTPSSTKAETTSIKPCSLP
PPQEFGKGNPFMLFLCLSILLEHRDHIIKNSLDYNELAMHFDRLVRRHNLSRVLQRAKAL
FADYLQSEVWDSEEGDEVSSDSPTTASAALHSPSSTISARPIYSPLVLPQASSPNSTYNL
ATTISSPTAEVSLSPMS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaggaggaaaggggggtggttcgagtcaaagtaaagaaatgtgacggggtg
cttcctgtggagttccgttcctttgctgttgatcctcagataacatcgttggaggtcctg
cagcacatcctcatcagagccttcgatttgaacgggaggcggaattttgggatcagttac
ctgtctcgagatcggagtggtgctgaaatatatttgggtctgttatctgactgggattta
gatgttgcatttgtcagtgcagccaagccgtatctacagctgaagatggacataaagccg
tcagaagacagtcctgtaatggaggactgggacatcatcagccccaaagatgtgattggc
tctgagcagcttctgtcagacaagacgaggtctttggcctctgcagctcttcccttgacc
cagtcttttctgtcccaggtgggccgcaccctgtccaaagttcaacaggtcttcagctgg
tcttacggggaggagatcaagcctttcaagccccccctgactgatgctgagtttcacagt
tatctcaatggacagggtcagctgacacgacctgaggagctgagactgaggatctaccat
ggtggtgtagagccttccctgcgcaaggttgtttggcggtatctccttaatgtctaccct
gatggactgagtggacaggaaagaatggactacatgaagcggaagaccagggagtatgac
cagctgaagagtgagtggacggcccgtgccagccaggaagaccttgaattcatccgaggg
aacgttctcaaagatgtcctgaggacggatcgggcccacccatactacgccggctcagag
gacagtccacatctgactgccctcacagatctgctcaccacattcgccatcacacatcca
cagatatcatactgtcaaggcatgagtgacattgcctcccctatacttgcagtcatggac
aatgaagcgcatgccttcatttgcttttgtggcatcatgaaacgcttggagggaaacttc
cggcccgacgggcagctcatgtctattaagttccagcatctaaagctgcttctgcagtac
tcagatcctgaattttactcctatctggtctcccgaggagctgacgacctctttttctgt
taccgctggctacttctggagctcaagcgagagtttgcgttcgatgacgctctgaggatg
ctagaggtgacttggagctccttgcctccagatcctcctgaaaccgaagtggaacttctg
ggaccaccgctagagtcggatgaaacaatggcacaatgcacagacaatgacaagacagct
gagaactgcctagcagacgatcaggaacaaaaagagaagcggaggcgacacatgctgaga
ccttcaagagaagaaccagatgccagcaggatcactgtcacagaagagaaagaggggcag
aacatcagcactggaaaggaaagcgaaggcgctgattgtgatatccctcaagtgacggaa
aaagctgatttgcaggctcctccttttgagagacaaactagttttggagagtttaaatac
tataccgcccgaaatgaagatagctttgacatggagcaacaacagggtgtggtggcttcc
aaatcagtatcaagcatcccgtcgcgccagtcaacaatggacagtgaggacgacccagaa
gaaagaacacctctcataaaaaactgtgaaaatggtttctctccaatgtcatcaccttcc
ctgttacccaacggcctcccaacgtggaaaactggctcctctacatcttcagcttcacct
tccagctggccaggtgcttctccagactctcctccaaaatccacaaccaatggaagagag
gccttaccgagaactgtccaagaagtcctgtcctcctctgcccaagtgctcagcagtacc
gggatcaactcgcccatgacccccactgtaaaaacatctgttgcatctccctcccccact
cagaaccgatccctactctcctcacccattttgtctttcggaagaggcccctcgctgccg
ggcagcagggcgtcctccaacaacctctcttcacctggcaacaaatcccccatcaccaca
gctaacacacccagttccacaaaagccgagaccaccagcatcaaaccgtgctccctgcca
cctcctcaagagttcggcaaaggcaacccctttatgctgttcctgtgcctgtccatcctg
ctggagcaccgagaccacatcatcaagaacagcctggattacaatgagttagccatgcac
tttgatcgccttgtgcggcgccacaacctgagcagggtgctacaaagagccaaggcctta
tttgcagactacttgcaaagtgaagtatgggactcagaggaaggggacgaggttagctcg
gactccccaacgacagcctcggctgcccttcactccccttcttcaaccatctctgcccga
cccatttacagccctttagtgttgcctcaggcatcatctccgaactcaacctataacctc
gcaaccaccatctcctccccgacagctgaagtttccctttctcctatgtcctga
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