Scomber japonicus (chub mackerel): 128356877
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Entry
128356877 CDS
T09718
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128356877
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128356877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_SB
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128356877
NCBI-ProteinID:
XP_053173024
LinkDB
All DBs
Position
4:complement(1069663..1127856)
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AA seq
514 aa
AA seq
DB search
MSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRDNPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDEEDECEKKD
DDGEKKTKHSIDGILGDKGSRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLPTYQLPESSYPTNTLSQDGGGTVHRPQPLPPSTMHQSSLSSTDSSSAYGLTSNRHGF
SSYSDSFMSSAPNNHVNSVSNGLSPQVMSILSNTSGVSSQPQHDFSISPLHSALDSSPSN
AISASCSQRSADASIKTVDSLPSSQSYCPPTYSTTSYSVDPTVAAGYQYSQYGQTAAAVD
YLAKNVGLSSQRRMKLADHSAVLGLLQVETGQAY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttgccaggaacggtaccgcgaatgatgcgccccgctcccggacagaactat
ccccgtacaggattccctctggaagtgtccactcctctgggacagggacgggtcaaccag
ctcggcggggtgttcattaacggccggccgctgcccaatcacatccgacacaagatagtg
gagatggctcaccacgggatccggccctgcgtcatctcccgacagctgcgggtctctcac
ggctgcgtctccaagatcctctgccgctaccaggagaccggctccattcggcccggagcg
ataggaggcagcaagcccaggcaggtagccacgccggacgtggagaagcggatagaggag
tacaagcgggacaaccccggcatgttcagctgggagatccgggataagctgctgaaggac
ggtgtgtgtgacagaagcacagtcccttcaggtgaggcctcctctgtgagttcgatcagc
cgtgtacttcgggcgcgatttggaaaaaaggacgaggaggacgagtgtgagaagaaggac
gacgacggagaaaagaaaaccaaacacagcatcgacggcatcctcggcgacaaaggcagt
cggatggatgaagtgtcagacgtggagtcagagcctgacctccccctgaagaggaagcag
cgcaggagtcgaaccacgttcacagcagagcagctggaggagctggagaaggcttttgag
agaacccactaccccgatatctacaccagggaggagctggcccagaggaccaaactcact
gaggcccgggttcaggtgtggttcagcaatcgaagggccaggtggcgaaaacaagccgga
gccaatcagctagcagcattcaaccacctgttaccgggtggatttcctcccacagggatg
ccaacacttcctacataccagctgccagagtccagctaccccaccaacactctgtcccaa
gacggtggcggtacagttcaccgcccccagccgttacctccatcaactatgcaccagagc
agtctgtccagcactgacagcagctcggcctatggtctgacctccaaccgccatggcttc
tccagctactccgactcctttatgagctctgcacctaataaccatgtcaactccgtcagc
aacggactctccccacaggtgatgagcatcctgagtaacaccagtggagtctcctcacag
cctcagcacgacttctccatctcaccgctccacagcgccttggattcctctccatccaac
gccatctcagccagctgcagccagcgttctgccgacgcctccattaagacggtggacagc
ctcccctcgtctcagtcctactgcccccccacgtacagcaccaccagttacagcgtggac
cccaccgtggcagccggctaccagtacagtcagtacggccagactgcagctgctgtggat
tacctggctaagaacgtcggcctgtccagccagcgcaggatgaagctggccgatcactca
gctgttctgggactgctgcaggtggagaccggccaggcttactag
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