Scomber japonicus (chub mackerel): 128356904
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Entry
128356904 CDS
T09718
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03030
DNA replication
sjo03410
Base excision repair
sjo03420
Nucleotide excision repair
sjo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128356904 (rfc2)
03410 Base excision repair
128356904 (rfc2)
03420 Nucleotide excision repair
128356904 (rfc2)
03430 Mismatch repair
128356904 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128356904 (rfc2)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128356904 (rfc2)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128356904 (rfc2)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128356904 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
128356904 (rfc2)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128356904 (rfc2)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128356904 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
128356904 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_14
AAA_lid_RFC1
RCF1-5-like_lid
AAA_16
Viral_helicase1
AAA_11
Rad17
Mg_chelatase
nSTAND3
DEAD
AAA_5
AAA_19
MipZ
RuvB_N
AAA_28
DNAX_ATPase_lid
AAA_assoc_2
AAA_30
AAA_18
SLFN-g3_helicase
AAA_23
NTPase_1
AAA_25
ABC_tran
AAA_24
MeaB
RNA_helicase
AMP-binding_C_3
MCM
T2SSE
AAA_2
Motif
Other DBs
NCBI-GeneID:
128356904
NCBI-ProteinID:
XP_053173065
LinkDB
All DBs
Position
4:complement(35867148..35871155)
Genome browser
AA seq
345 aa
AA seq
DB search
MAEQKEQKEEMEVMEAEQKQPAGSYQLPWVEKYRPLQLQHVVGNHETVSRLQVFAREGNV
PNIIISGPPGTGKTTSILCLARALLGGSMKEAVLELNASNERGIDVVRNKIKMFAQQKVT
LPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLR
YSKLTDGQILSRLQEVVEQERLSASDDGLEAVIFTAQGDMRQALNNLQSTHSGFGFINSD
NVFKVCDEPHPLLVKGMLGHCVEGNISEAYRVVEQLWALGYSPEDIIGNIFRVCKTFTMA
EYLKLEFIKEIGYTHMRVTEGVNSLLQMAGLLGRLCSKTAPPAGC
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagaaggagcagaaggaggagatggaggtgatggaggctgagcagaagcag
ccagcgggaagctaccagctgccctgggtggagaagtaccggccgctgcagctgcagcac
gtggtgggaaaccacgagaccgtcagcaggctgcaggtgttcgcgcgggaggggaacgtg
cccaacatcatcatatccggcccccccggcacggggaagaccaccagcatcttgtgtctg
gctcgagctctgctgggaggatccatgaaggaagcagttctggagctcaacgcctccaac
gagagaggcatcgatgtggtgaggaacaagatcaagatgtttgctcagcagaaagtgacg
cttcctaaaggacgacacaagatcatcatcctggacgaagccgacagtatgacggacggg
gctcagcaggctctgaggagaatcatggagatttactcaaagacgactcgcttcgctctc
gcctgcaacgcgtcagataaaatcatcgagccgatccagtctcgctgcgccgtgctgcgt
tactccaagctgacggacggacagatcctgtcccggctgcaggaagtggtggagcaggag
cgtctgtccgcgtccgacgacgggctggaggccgtcatcttcacggctcagggagacatg
agacaggcgctgaacaacctgcagtccactcactccggcttcggattcatcaacagcgac
aacgtgttcaaagtgtgcgacgagccccaccccctgctggtgaaaggcatgctgggacac
tgcgtggaggggaacatcagcgaggcgtaccgcgtggtggagcagctgtgggcgctcggt
tactcccccgaagacatcatcgggaacatcttcagggtctgcaagaccttcaccatggcc
gagtacctgaagctggagttcattaaggagatcggttacacacacatgcgagtgactgaa
ggagtgaactctctgctgcagatggccggtctgctgggtcgactctgcagtaagacggcg
ccccctgctggctgctga
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integrated database retrieval system