Scomber japonicus (chub mackerel): 128356929
Help
Entry
128356929 CDS
T09718
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128356929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128356929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128356929
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
128356929
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128356929
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128356929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BAR
PH_11
PH_21
TPR_TTI1_N
PH_8
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
128356929
NCBI-ProteinID:
XP_053173091
LinkDB
All DBs
Position
4:complement(24056514..24145812)
Genome browser
AA seq
842 aa
AA seq
DB search
MTVDFEECIKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIINYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKHFDRVREDMEIAQVKNAQAPRNKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKREMEHKH
ATIQQRTLMQDFSYDETKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPSKSCMLQAESEKLRQAWIQAVQA
SIASAYRESPDTYYIEHLDRTASPSTSSIDSASEPRERSARGETILQRIQCLPGNEQCCD
CGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVIN
HIYEGSYQEQGLKKPLPSSSRQEKEAWIKAKYVEKKFLKKLGSTEILINGERKSERRWSV
KKCRRHNSATTVPKTRRRYRQEPGSISPSTLSSAAAKFRRDSLFCPDELDSLFSYFDTGS
GPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEVSEDSSGEAELEAEPETSDP
EDIRDIHPGALLYKASKARNLPIMAEALAHGADVNLVNEEDEGKTPLIQAVIGGSLIACE
FLLQNAADVNQRDTRGRGPLHHATYLGHTGQVCLFLKRGATQNDGDEDGHDPLSIAVQQA
NADIVTLLRLARMNEEMRESEGPFGQPGDATYLDIFREFSHMASHNPEKLKRRSVHFRHS
FR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgtattaaagattcaccccgatttagggcaaatatcgat
gaggtggagactgaggtggtggagattgaggcaaaactagataagctggtgaagctatgc
agtgggatgattgaagcagggaaggcctatgtcagcgccaacaagctcttcgtcaacggc
atccgggatctgtctcagcagtgcaagaaggatgaaatgatctcggagtgcctggaaaag
tgcggggaaagcctccaggaaatcatcaactaccacatgatactgttcgatcaagctcag
cggtctgtaaagcagcagttgcacaactttgtgaaagaggatgtgcggaagttcaaggag
accaagaagcacttcgacagggtgcgtgaggatatggaaatcgcccaagtgaagaacgct
caggcgccgaggaacaaacctcacgaggtcgaagaagccaccggcacgctcagcatcacc
cgcaagtgtttcagacacctcgctctggattacgttctccagatcaatgtcctccaagca
aagaagaaatttgagatcctagacgctatgctgtcgttcatgcacgcccagtactctctg
ttccagcagggctacaacctgctggatgagatcgacccctacatgaagaaactggctgct
gagctggatcagctggtgattgattcagccatggagaagagggagatggagcataaacat
gcaaccattcagcagaggaccctcatgcaggacttctcttatgacgaaacaaaggtggag
ttcaatgtggacgctcctaatggtgtggtgatggagggctacctgttcaagagggccagc
aatgcctttaagacttggaacaggcggtggttctccatacagaacagtcagctggtctat
cagaagaagctcaaggattctctgacggtggtggtggaggacctccggctgtgctctgtt
aaaccatgtgaggacatcgagaggaggttctgctttgaggtcgtctccccctccaagagc
tgtatgcttcaggctgagtccgagaagctaagacaagcgtggattcaggcggttcaagcg
agcattgcctccgcctacagagaaagcccagacacctactacatagagcatctggacaga
acagcctccccgtccaccagcagcatcgattcagccagtgaaccgcgggagcgcagcgcc
cgaggggagaccatcctgcagcggatccagtgtctgccgggtaacgagcagtgctgcgac
tgcggacaggccgaccctcgctgggcctccatcaacctgggcatcctgctgtgtatcgag
tgctccggcatccacaggagtctcggagttcactgttcgaaggtgcgctcactcacgctg
gactcatgggaaccagaattattaaagttaatgtgtgagcttggaaacagtgtcatcaac
catatctatgaaggctcataccaagaacaaggtctaaagaaaccgttaccgtccagctca
aggcaggaaaaagaggcttggattaaggcaaagtacgtcgagaagaaattcctgaagaag
ctgggctccacagagatactcatcaacggagagaggaagtcggagcggcggtggagcgta
aaaaagtgtcggaggcacaacagcgccaccacggtacccaaaacacggcgaagataccga
caagagcctggaagcatctctccgtctaccctctcctcagctgctgctaaattcagacga
gactccctgttttgtcccgatgagctggactctctcttctcctactttgatacgggatca
ggacctcgaagtccggcaggcctcagcagtgacagcgggttaggaggcagcacagacggc
agcacggacatcctggtgtttggctcggtggtggacagcgttacagaggaagagtgtgag
gtgtccgaggactcgagtggcgaggctgagctggaggccgagccagagacgtcggacccg
gaggacataagggacattcatcctggagcgctgctctacaaagcctcaaaagcccgcaac
ctgcccatcatggctgaagcactggcccatggagccgacgtcaatctggtcaacgaggag
gacgaaggaaagacgccgctcatacaggccgtcatagggggttcattgatagcctgcgag
ttcctgctgcagaacgctgctgacgtcaaccagagagacacgagagggcggggccccctg
catcatgccacatatttgggacacacggggcaggtgtgtctattcctcaaacggggagcc
acacagaatgacggagatgaggacggccacgatcctttgagtatagctgtacagcaggcc
aatgcagatatagtcacgctgctgcgtctggccaggatgaacgaggagatgcgggagtcg
gagggaccctttggtcaaccaggtgacgccacataccttgacatcttccgggaattttcc
cacatggcatcacacaacccagagaagctgaaacggaggagtgtgcacttccgacactcc
ttcaggtag
DBGET
integrated database retrieval system
