Scomber japonicus (chub mackerel): 128357098
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Entry
128357098 CDS
T09718
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128357098 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128357098 (lamb2l)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
DUF7310
F5_F8_type_C
RasGEF_N_2
Motif
Other DBs
NCBI-GeneID:
128357098
NCBI-ProteinID:
XP_053173314
LinkDB
All DBs
Position
4:6469222..6513413
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AA seq
1881 aa
AA seq
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MVFASNTCKPIELNVETLRGPSSSVLLPLTVLLSMRPGVPMSIMAVFLSLLMLALNVFGQ
DLPSGPHGCTEGSCYPATGNLLIGRAINLTATSTCGLDGPEQYCIVSHLQESDKCFECNS
RRHYDPYHHKNSHRIENVIYLADRFEDNTWWQSVNGEESVSIRLNLEAEFHFTHLIMKFK
TFRPAAMIIERSADFGRTWRPYRYFASNCTRTFPGIPANGLHHINDIICEERYSDIEPST
NGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINFTKLNTLGDDLLDRRSDVLQKYYYA
IYELVVRGSCFCYGHSSECARVPGVDTQEHGMIHGRCVCKHNTEGLNCERCRPFHNDLPW
RPAEVENPHTCRECNCNGHSEQCHFDMAVYLATGNVSGGVCDECQHNTMGRNCEMCKPFY
YKEPNRDIRDPRVCVACDCDPVGSLEGGVCDSHTDVDMGMIAGQCRCKAHVKGMRCDDCK
EGYYGLSQNDPLGCQPCNCDPRGIIMVGAPCDQISGDCSCKRYVTGRYCNQCLPEYWGLS
NDLAGCRQCDCDFGGAFNNRCMMENGQCDCRRHLIGRQCSEVQPGYFCAPLDYYKYEAED
TTGYSPSDPALPGKVRPQAETDCVQHLSNQLRRHRRHRRITNSQQHRAALRRIRQLQQTP
DVRPVHREHTPSHMVTWTGPGFARVKDGAGLVFTIDNIPYAMEYDIMIRYEPESTEDWEA
IVSISSVLLPSSLRCGNLLPTEQLYTVTLPHRNRYIQMPRPFCFEPSNRYTVSIRFQRHG
VSHRHLTAFILIDSLVLIPKYTELPGFKDDPEAEHRREEMIRYMCLDSFMMTPMPALAEM
CTKLICSISSIIHDGALACQCDPQGSLSGECNKVGGQCHCKPNVMGRRCDQCAPGTYGFG
INGCTACDCHAEGSFSHQCDSVTGQCHCRQGATGRQCSDCQPGQWGFPSCSPCQCNGHTD
SCDPQTGECRDCRDYTAGHLCDQCMTGFFGNPMLGSGEHCRPCPCPGNPGSDHFNGYTCQ
ADHSSNQIICNCKQGYAGSRCDQCAPGYYGNPEQPGGQCLPCECSGNIDTQDPDSCDSRT
GQCLKCLYHTDGPSCDYCQLGYYGNALAHDCRRCTCVTAGTMQSACSDGQCHCDRNTGAC
PCRENVAGHNCDQCAHNHWNYGQDLGCEPCGCHPHHALGTHCNMFTGQCHCRPGFGGKQC
TECEQFHWGDPRVQCQECNCHYLGSEMAQCDRVTGACECREGASGQRCDECARGFTGTFP
NCVQCHPCFQLWDDAVCQIKRDLEHIQYTIEKIQENGLTPGVGHTRIKELEMKLKQVQDL
ISQEDSDRIHQLIGQSIDDLRAEIALTDGRLMGVTRELNTTAEEEGALRRTLTDMERELR
GINTTVANKKQQLDDYLTSGFADQFEKVKKYYQKSLEAEEKCNASVSGPLSPVEQSKQTR
KTTEELLDASKDKFLRAMAAQNKSLDELQQKADGLDKTINHLSDKVCGGHGNTSANGSCS
DSRCGGAGCRDDKGNRVCGGEGCNGTVSASMAALNLAQNVSDALDAVNKELQGVAGKLQD
IATLTQDVKNQAMNMVKKAQKKKEHFENSNKMLKDFIKKIRDFLTEEGADPESIEKVAMQ
VLSITLPVNRTMIDKMIMQIKDNLSNLTNIDAIVNQTSQHIKTAKDLLEKAQDAKIRADG
VKDLADGTKQALDVSEKAIEKAKKALKEAVNNLNSTRNATAEVEEKLTQLEDKQMEVMMR
LNNLSMSVEALKNKTEQNREMAKDAKALADNATNLATSVQQSLNDTEKRYQDLQKKVDSL
GGEAGGLDSINQKAKEIKKEAEDLLDVANKGMQKLMELEKNFRRNERRMQKQRMELEELH
GNATTVRDHIRKSVQQYSNCQ
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgcgtctaacacgtgtaaacccattgagctgaatgttgagacgttgcggggt
ccctcctcttctgtgctcctgcctttgacagtcctgctgtccatgcgtccaggcgtcccg
atgtccatcatggctgtgtttctgagcctcctcatgttggctctgaatgtgtttggccag
gacctcccatcaggccctcacggctgcacggaggggagctgttacccggcaacaggtaac
ctcctgattggacgagccattaacctaaccgccacatccacttgtggcttggacggtcca
gagcagtactgcattgtgagccatctacaggaatcagacaagtgttttgagtgtaactcc
cggcgccactatgacccgtaccaccacaaaaacagccaccgcatcgaaaatgtgatctac
ctcgcagatcgattcgaagacaacacctggtggcaatctgtcaacggagaggagagcgtc
agtatcagactgaacctggaggccgaattccacttcacacatctcatcatgaagttcaag
acgttccgacctgcagccatgatcatcgagcgttctgctgatttcggacgcacatggcgc
ccctaccgctactttgcctcaaactgtaccaggaccttcccaggcatccccgccaacggc
ctgcaccacatcaatgacatcatctgcgaggagcgctactctgacatcgaaccctccacc
aacggagaggtcatttataaagttttggatcctgccattcatgtgaaagacccctacagc
ttggacattcaagaacttctgcgcatcaccaacctgcgtatcaacttcacaaagctgaac
actctgggagacgacctgctggaccgacgctccgacgtcctccagaaatattactacgcc
atctacgagctggtggtgagagggagctgcttctgttacggacactcctcagagtgtgcc
agggtgccaggggttgacacgcaggaacacggcatgatccacggtcgctgcgtatgcaaa
cacaacacagagggcctgaactgtgagcgatgtcgtcctttccacaacgacctgccgtgg
agacctgccgaggtggagaacccacacacatgcagagagtgtaactgtaacggccactca
gagcagtgccactttgacatggcggtgtatttggccacgggtaacgtcagcgggggagtg
tgtgatgagtgtcagcacaacaccatgggacgcaactgtgagatgtgcaaacctttctat
tacaaagagcctaacagggacatcagggatccacgggtttgtgtcgcctgcgactgcgac
ccggtcggctctttggaggggggagtgtgcgacagccacaccgacgtggacatggggatg
atcgcgggacagtgtcgctgcaaagcccacgtcaaaggcatgcgctgcgacgactgcaag
gagggttactacggcctgagccagaacgacccgctcggttgccagccatgcaactgtgac
cctcgtggcatcattatggtgggagccccgtgtgatcagatcagtggagactgctcctgc
aaaagatacgtcaccggccgctactgcaaccagtgtctgcctgaatactggggactcagt
aatgacctggctggctgcagacagtgtgactgtgatttcggtggagccttcaacaatagg
tgcatgatggagaacggacaatgcgactgcaggagacacctcataggtcgacagtgttcg
gaggtgcagcccggctatttctgcgctccactcgactactacaagtacgaagcagaagat
accacggggtactcacccagcgacccagcgctgccgggcaaagttcggcctcaggcagag
acggactgcgttcagcacctcagcaaccagctgaggaggcaccgacgtcatcgccgcatc
accaactcacagcagcatcgggcagcgctgagacgcatccgccagcttcaacaaacaccg
gacgtgagacccgttcacagagaacacactcccagccacatggtgacgtggaccggtccc
ggttttgcccgtgtcaaagacggtgccggcctggtgttcactatcgataacatcccatac
gccatggagtatgacatcatgatccgctacgaacctgagtccacagaagactgggaggcc
atagttagtatttcatctgtactgctgccttcaagtctccgatgtggaaaccttctacca
accgaacagctctacacagtcaccttgccgcaccgcaacaggtacatccagatgcccagg
ccgttctgtttcgagccaagcaatcgttacacggtgtcaatcaggttccagcgccacggg
gtctcacacagacatctcaccgccttcattcttatagactcgctggttctgatccccaaa
tataccgagcttccgggtttcaaagacgatccggaggcagagcatcgacgagaagagatg
attcgctacatgtgcctggattcctttatgatgacgccgatgcccgctctggctgagatg
tgcaccaaacttatctgtagcatttcatccatcattcacgacggtgctctggcttgccag
tgcgacccacagggctccctcagcggtgaatgtaataaggtcggaggtcagtgccattgt
aaacctaacgtgatgggtcggcgctgtgaccagtgtgctccaggaacctatggttttgga
attaatggctgtactgcttgtgactgccatgcggagggttcgtttagccaccagtgcgac
tcagttacaggccagtgccactgcaggcagggggccactgggcgtcagtgttctgactgc
caaccaggtcagtggggcttccccagctgcagcccctgtcagtgtaacggccacacagac
agctgtgacccccaaaccggagagtgtagagactgcagggactacacggcaggacatctc
tgtgaccagtgtatgacaggattctttggaaacccgatgctgggctcaggggaacactgt
cggccctgcccctgccccggtaaccccggttcagaccactttaatggctacacatgccaa
gctgaccacagctccaaccagatcatctgtaactgcaaacaaggctacgctggatcacgc
tgtgaccagtgtgcccctggttactatggcaacccagagcaacctggcgggcagtgcctc
ccgtgcgagtgcagcggcaacattgacacccaggaccctgactcatgtgactccaggact
ggccaatgtctcaagtgcctgtaccacactgacggcccatcctgtgactattgtcaactc
ggttactatggcaatgctttggcccatgactgcagacgctgtacctgtgtgactgctggc
accatgcagtctgcttgtagtgatggacagtgtcactgtgaccggaacactggagcctgc
ccctgcagggagaacgtggccggccataactgtgaccagtgtgctcacaaccactggaac
tatggtcaggacctgggctgtgagccctgtggctgccacccacatcacgctctgggaact
cactgcaacatgttcacaggccagtgccactgtcgtccaggctttggagggaaacagtgc
actgagtgtgagcagttccactggggagacccacgggtgcagtgtcaagagtgtaactgc
cactacctgggctcggagatggcccagtgcgaccgggtaacgggggcgtgtgagtgcagg
gagggagcatcggggcagcgctgcgacgaatgcgcccgcggcttcaccggcaccttcccc
aactgcgtccagtgtcacccgtgcttccagctgtgggacgacgccgtgtgccagatcaaa
cgggacctggaacacattcagtacaccatagagaagatccaggagaacgggctcacgccg
ggagtcgggcacacgcggatcaaagagctggagatgaagctgaagcaggtacaggatctg
atcagtcaggaggacagcgacagaatccaccagctgatcggacaaagcattgatgacctc
agggcggagatcgcactgactgatggacgactgatgggtgtcacccgagagctaaataca
acagcagaagaagagggggcactgagacgcacattgactgacatggagagagagctgaga
ggcatcaacaccaccgtagctaacaaaaaacagcagctggacgactacctcacctcagga
tttgcagatcaatttgagaaagtgaagaagtactatcagaaatcattggaggcagaggag
aagtgcaacgcctcagtgagtggtcctctcagtcctgtagagcagtccaaacaaacccgc
aaaaccacagaagagctgctggacgccagtaaagacaagttcctccgtgccatggctgct
caaaataaatcattagacgagctgcagcagaaagccgacggcctggacaagaccatcaac
cacctgagtgacaaggtatgtggcggtcatggcaacaccagcgccaacggcagttgctca
gacagccgatgtggcggtgccggttgccgtgacgacaagggaaatcgcgtgtgcggagga
gaaggatgtaacgggacggtgagcgcttctatggcagcgctgaatctcgctcaaaacgtc
tcagacgctctggacgctgtcaataaggagctgcagggcgtagctggaaagctccaggat
atagccactctgactcaggatgtgaagaaccaggctatgaacatggtgaagaaagcccag
aagaagaaagaacactttgaaaactccaacaagatgctgaaagatttcattaagaagatc
agagacttcctcactgaggagggagcagatccagagagcatagagaaggtggctatgcag
gtcttgtcgatcacactgccggtcaacaggaccatgatagacaaaatgatcatgcagatt
aaggataacctttccaacctcaccaacatcgatgcgatcgtcaaccaaacctcgcagcac
atcaaaactgccaaggatctgctggaaaaagctcaagatgccaagatccgtgcagatgga
gtgaaggatttagccgatggtaccaagcaggcgttggatgtgtcagagaaagccatagag
aaagcaaaaaaagccctgaaggaagccgtcaacaacctgaacagcacaaggaacgctaca
gctgaggtggaggaaaagctgacgcagctagaggacaagcagatggaggtcatgatgcgt
ttaaacaacctctccatgagcgtggaagctctgaagaacaagacggagcagaacagggag
atggcgaaggatgccaaagcactagctgacaacgccactaacctggccacttcagtgcag
cagagcctcaacgacacagagaaacggtaccaggacctgcagaagaaggtggactctctt
ggcggggaggctggaggcctggacagcatcaaccagaaggccaaggaaatcaagaaggag
gcagaagacctcctcgacgtagccaacaagggcatgcaaaaactcatggaactggagaaa
aacttcaggagaaacgagaggcggatgcagaagcagcgcatggagctggaggagctccat
ggtaacgctaccacggtgcgggaccacatccgaaaatcagtgcagcagtacagtaactgt
cagtaa
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