Scomber japonicus (chub mackerel): 128357100
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Entry
128357100 CDS
T09718
Name
(RefSeq) antigen WC1.1
KO
K06545
CD163 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128357100
CD molecules [BR:
sjo04090
]
Proteins
128357100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
128357100
NCBI-ProteinID:
XP_053173316
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All DBs
Position
4:6839406..6858751
Genome browser
AA seq
1303 aa
AA seq
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MWFLLLLYAALFEQVIIEVTSQRLYLKDGDGPCEGYPKIYNDNAWGYLGDSVQNSNTEKV
VCKTAQCGELNSIEDVSRDIDGTTWLNEVNCTGAEDQLWNCTFPGWGTSVYLKPTVKKVK
CSYNIKIDLEGDECAGPVRYSTDGGKTTSGYLCFDKFATKAADHICESLGCGNSLEDPSS
ASVASNQPIMKVNCPEKMDFTNLWQCVTQEAPKCEKAASVTCTGYKRLQLSGNSTNACSG
RLQKEDGENWTDIKLSDLKHTADELCHKMHCGGLSVNSSNNDTQLTCSGVFNIQPVGQNR
PSQGVLSGRLDNKYDARFQEQVYLYNVKVILKDNSTSCYGSVYMKVNDTEHPVCGTKWNP
KNAEKVCSELKCGKLVNTDFKPSRTSQGWIMDEVDCKGKESSLWHCKAKRDPKTCQSHAY
VICEGSVNARLVDGPGKCAGRLEIHFEGEWQNVDKAQWVDSYSNVVCQQLKCGDARKSEK
FSMGSSPFLRKKITCNAGVKHISECTVKELSNSQGDREAVGIICEEHKVAFLEGKKSCSG
KVRIEKGDVISWVSGSNETWNNDTANTVCRQMHCGEAQSFNHTPPSNKNKRLIESYKCSS
NTTSLFDCETSPLSSDSNATIATVTCSGKINVNLTNKCWGMVNVCMGGECGGVCKNTWTD
NMSESLCKELGCGNISLKSYKQESSVVIVKSLHSPKNAAKLANYNFVKNDDNDKTFSQNP
AYVVCSGSIKPKLDTFGDKCSGNVLLSYEDKWLPVCKEALKDKDTRDAICKELDCGDAVN
STDYWGHPTEKKQISQLQYTSNDLKKCVAEEKSCPLGGLQCSERRTITLNDACTGAVYVK
SQEEKNIVPVSAEGFSKKEGEKLCKDLKCGALKLVAAKNPSETLWNKSFNCTGVGEEGKI
WDCEKPQASTQKQQAVIECEEKPNINISGGCYGQVKINGLEVCNRKWEDKYSHMVCQEKG
CGNAIIDRLHNSNPVSSTEYHHVHCEDFHHKIGQCKRFKARCEGKGKLVSVYCTGNVKFR
TTSICGGQIEVNYRDTWEKLLEFPVRFKKKLCEELNCTDVLKSEPQYQKQEVTMDTSVEC
QDGTLDFKYCVQKKDPISTKKPAEIYCQGYEPPSTQERAEPFPTVSVIVGVGFLLVVVVL
TIIFVRMCLIRRAKSDSLRMFPRKEVEFESGDMDDFHNKSNEMEDFRRGRFRSDSEVIAG
HDARSNSSYPYDDIDEMEEGRPLTSQADTDAASGDYMPMPDNGVTYEVDDPQENYDDIEA
SPEVTQTKAQVYNTPKSPTESVAVAPPGLPKGDEDYLVPGQDG
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcctccttctcctctacgcagctctctttgagcaggtgatcatagaagttaca
agccaaagactgtatcttaaggatggagacggcccgtgtgaaggctaccctaaaatctac
aatgacaacgcttggggctaccttggcgacagtgtccagaacagtaacactgaaaaagtg
gtgtgcaagaccgctcaatgcggggagctcaactcaatagaagatgtgagtcgagacatt
gacggcacaacctggctcaatgaagtgaattgcactggagcagaggatcagctgtggaac
tgtacatttccaggttggggcaccagcgtctacctaaagcctactgtgaagaaggtgaaa
tgttcttacaatatcaaaatcgatcttgaaggagatgaatgtgcaggacctgtccgatac
tcaacagatggcgggaaaacaacttcaggttacttgtgttttgacaaatttgcaacgaaa
gcagctgatcatatctgtgaaagcctcggatgtggtaactccttggaagatcccagttcg
gcttcggtggcctcgaaccaaccaattatgaaagtcaactgtcccgaaaagatggatttc
acaaatctttggcaatgtgtaactcaggaagcacctaaatgcgaaaaagctgcttcggtc
acatgcacaggttacaagagactgcaactcagtggaaactcaacaaacgcttgttctggg
cggttgcaaaaggaagatggagagaactggactgacataaagctctcagacctcaaacac
actgctgatgagttgtgccacaagatgcactgtggtggtctcagtgtcaatagcagtaac
aatgacacacagctgacatgctcaggggtgttcaacatacagcccgtgggccagaaccgg
ccctcccaaggggtcttatcaggccgattggataacaaatatgacgccaggtttcaggag
caagtttacctgtacaacgttaaagtcattctgaaggacaacagtaccagctgttacggt
tccgtttatatgaaggtgaatgatacagagcaccctgtgtgtggcaccaaatggaaccca
aagaatgctgaaaaggtttgcagcgagctaaaatgcggaaaactagtgaatacggacttt
aaacctagtaggacatcacagggatggataatggacgaggtggactgcaaaggcaaggag
tcctcactgtggcactgtaaagccaagcgagaccccaaaacttgtcaatcccacgcctac
gtgatctgtgaagggagtgtcaacgcgagattggtggacggtcccgggaaatgtgctggg
aggttggagatccattttgagggcgaatggcaaaatgttgataaagcgcaatgggttgat
agctattcaaatgttgtctgccaacaactgaaatgtggagatgcaagaaaatctgaaaaa
ttcagcatggggtcaagtccattcctgcgaaagaagataacatgcaatgcaggagtcaaa
cacatatctgagtgtactgtgaaagagctgtccaacagccagggcgatagagaggcagtg
ggaataatctgtgaagagcacaaggtggcatttctcgaggggaaaaagtcctgttctgga
aaagtgaggatagagaagggcgacgttatctcctgggtttccggatccaacgagacgtgg
aacaatgacaccgccaacactgtgtgtcgacagatgcactgcggggaggcccaaagcttt
aaccacacacctccttctaataagaataaacgtttaattgaatcatacaagtgctcatcc
aacaccacatctctgtttgactgtgaaacatcccctttatcatcagactccaatgccact
attgccaccgtgacatgttcaggaaaaatcaatgtaaacctgaccaataagtgttggggt
atggtcaatgtttgcatggggggggagtgtggaggtgtgtgcaagaacacctggactgac
aacatgtctgagagcctgtgtaaagagctaggctgtgggaatatctccctgaaatcctac
aaacaagaatcaagtgtggtgatcgtcaagagtctgcactcaccaaagaatgctgccaag
ctggccaattacaactttgtcaaaaatgatgataatgataaaacctttagccaaaaccca
gcctatgtcgtttgctcaggtagcatcaagcccaaactagacacatttggagacaaatgt
tctgggaatgttctgctgtcctatgaagataagtggctcccagtgtgcaaggaagctctt
aaagacaaggacacacgagatgccatctgcaaggagctggattgtggtgatgcagtcaac
agtactgactactggggacatccaacagaaaagaaacaaatatcacagctgcagtatacg
tcaaatgacttaaaaaaatgtgtagccgaagaaaagtcctgccctcttggtggcctccaa
tgctctgaacggaggacgatcacactcaatgatgcctgtactggagctgtgtatgttaaa
tcacaggaagaaaaaaacatagttcctgttagtgcggaaggcttttcaaaaaaggagggc
gagaagctttgcaaggatctgaaatgtggggcccttaagttggtagcagcaaagaacccc
tctgagacactctggaacaagagcttcaactgtacaggtgttggagaagaagggaaaata
tgggattgcgaaaagccacaagcatccacacagaaacaacaggccgtaattgaatgtgaa
gagaagcctaacatcaacatctcagggggatgttacggtcaagtgaagataaatggcctt
gaggtgtgcaacaggaaatgggaggataaatattcacacatggtttgccaggagaaaggc
tgtggcaatgctattattgatagattacataatagcaatcctgtctccagtacggagtac
caccatgtccattgtgaggacttccatcacaaaattggccagtgcaagagattcaaagca
aggtgtgagggaaagggaaaattggtgtctgtttactgtactggcaatgtcaagttcaga
accacaagcatatgcggaggtcaaattgaagtcaattatcgagatacgtgggagaaattg
ttagagtttcccgtccgatttaaaaaaaaactgtgtgaagagctcaattgcactgatgtg
cttaagtccgagccccaataccagaaacaagaggtcaccatggacacatcagtggaatgc
caagacggcacactcgacttcaagtactgtgtccaaaaaaaagaccccatttctactaaa
aagcctgctgagatctactgtcaagggtatgagccgccctcaactcaagaaagagctgag
ccgttcccgacagtgtctgttatcgtgggcgtaggatttcttcttgttgtggtggtactg
accataatatttgtacgaatgtgcctaatcaggagggccaagagtgactcattgagaatg
tttccaagaaaagaagtagagtttgaaagtggtgatatggacgatttccacaacaaatca
aatgaaatggaagacttcaggcgtggtagattcagatcagattctgaagtcatcgcaggg
cacgacgcacggagcaattcctcttatccttatgatgatattgatgaaatggaggaaggt
cggcccctgacctctcaggcagacactgacgccgcctcaggagactacatgcccatgcca
gacaatggggtgacctatgaggtggacgacccacaggagaattatgacgacatcgaagcc
agccctgaggtcacacagactaaagctcaagtctacaacactcccaaaagcccaactgaa
agtgtcgcagtggcacctccaggattgccaaagggggatgaggactatctagtgccaggt
caagatgggtga
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