KEGG   Scomber japonicus (chub mackerel): 128357130
Entry
128357130         CDS       T09718                                 
Symbol
hoxc5a
Name
(RefSeq) homeobox protein Hox-C5a
  KO
K09305  homeobox protein HoxA/B/C5
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sjo03000]
    128357130 (hoxc5a)
Transcription factors [BR:sjo03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    128357130 (hoxc5a)
SSDB
Motif
Pfam: Homeodomain SEEEED DUF2209 Homeobox_KN
Other DBs
NCBI-GeneID: 128357130
NCBI-ProteinID: XP_053173350
LinkDB
Position
4:18073604..18075556
AA seq 228 aa
MSSYVDSSNLRQTSETTSPNTMFSFDLSGHGSSRYKGVNVNGIFTCPVPTTSVEREEMKT
SLRGNTDTPLPPGPQITMVSSSSSVDASGLNYGSGALLGRGADRDPERSAKSGGNKNHES
DRNAENTQAMKRNTNASQRQDSEQQPQIYPWMTKLHMSHESEGKRSRTSYTRYQTLELEK
EFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSKIKVKE
NT seq 687 nt   +upstreamnt  +downstreamnt
atgagttcttatgttgacagctccaatctcaggcaaacaagcgagacaacttctccaaac
actatgtttagtttcgatctatctgggcacgggtccagtcgttataagggtgttaatgtg
aacgggatattcacttgtcccgtccccacgacctctgttgaacgggaggagatgaaaact
agcctgcgtggcaacacggatactcctctcccgccgggaccacagataaccatggtctcc
agtagctcgtcggtggacgcaagcgggcttaactacggcagcggagcgctgctggggcga
ggggctgacagagacccggagaggagcgcaaaatccggcggcaacaagaaccatgagagc
gacagaaacgcagagaacacgcaagccatgaaacgaaacacaaacgcgagccagcgtcag
gacagtgagcagcagccacagatttatccatggatgacaaaactgcacatgagccacgaa
tcggagggtaagcggtccaggaccagttacacccgctaccagactctggagctggagaaa
gagtttcacttcaaccggtacctgagccgccgcaggcgcatagagatcgcccacaccctg
tgtctaaatgagaggcagatcaaaatctggttccagaacagacgaatgaagtggaagaag
gactcaaagatcaaagtgaaggaataa

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