Scomber japonicus (chub mackerel): 128357130
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Entry
128357130 CDS
T09718
Symbol
hoxc5a
Name
(RefSeq) homeobox protein Hox-C5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357130 (hoxc5a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128357130 (hoxc5a)
SSDB
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Paralog
GFIT
Motif
Pfam:
Homeodomain
SEEEED
DUF2209
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
128357130
NCBI-ProteinID:
XP_053173350
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All DBs
Position
4:18073604..18075556
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AA seq
228 aa
AA seq
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MSSYVDSSNLRQTSETTSPNTMFSFDLSGHGSSRYKGVNVNGIFTCPVPTTSVEREEMKT
SLRGNTDTPLPPGPQITMVSSSSSVDASGLNYGSGALLGRGADRDPERSAKSGGNKNHES
DRNAENTQAMKRNTNASQRQDSEQQPQIYPWMTKLHMSHESEGKRSRTSYTRYQTLELEK
EFHFNRYLSRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKDSKIKVKE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttatgttgacagctccaatctcaggcaaacaagcgagacaacttctccaaac
actatgtttagtttcgatctatctgggcacgggtccagtcgttataagggtgttaatgtg
aacgggatattcacttgtcccgtccccacgacctctgttgaacgggaggagatgaaaact
agcctgcgtggcaacacggatactcctctcccgccgggaccacagataaccatggtctcc
agtagctcgtcggtggacgcaagcgggcttaactacggcagcggagcgctgctggggcga
ggggctgacagagacccggagaggagcgcaaaatccggcggcaacaagaaccatgagagc
gacagaaacgcagagaacacgcaagccatgaaacgaaacacaaacgcgagccagcgtcag
gacagtgagcagcagccacagatttatccatggatgacaaaactgcacatgagccacgaa
tcggagggtaagcggtccaggaccagttacacccgctaccagactctggagctggagaaa
gagtttcacttcaaccggtacctgagccgccgcaggcgcatagagatcgcccacaccctg
tgtctaaatgagaggcagatcaaaatctggttccagaacagacgaatgaagtggaagaag
gactcaaagatcaaagtgaaggaataa
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