Scomber japonicus (chub mackerel): 128357134
Help
Entry
128357134 CDS
T09718
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2
KO
K06550
L1 cell adhesion molecule
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128357134 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128357134 (l1cama)
04090 CD molecules [BR:
sjo04090
]
128357134 (l1cama)
04091 Lectins [BR:
sjo04091
]
128357134 (l1cama)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
L1 family
128357134 (l1cama)
CD molecules [BR:
sjo04090
]
Proteins
128357134 (l1cama)
Lectins [BR:
sjo04091
]
I-type lectins (Siglecs)
128357134 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Pur_ac_phosph_N
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
128357134
NCBI-ProteinID:
XP_053173355
LinkDB
All DBs
Position
4:17186517..17205544
Genome browser
AA seq
1275 aa
AA seq
DB search
MPHTQRQQVGSRGQCSSRLLILLLLSLAAQLSHAAIHIPSNFKMPPMITTQPGSVIVFSV
EDLGMNCEASGNPAPVFHWTKDGKAFDPGSDPELKVSKDSGSFVFYTRSNTMDNLRQYQG
KYVCYASNVLGTAVSNEARFTMDEPPTQQKEEKIKVNSEEGSSIVLKCNPPQSSLEPIIH
WMDWRLHHIKLSERVVVGKDGNLYFAHLTTEDSRDDYICNVQYLLTRTILAKEPTILTVN
PSNSLRNRRPLMMRPAGIHSSYVALRGQTLELECIVQGLPTPKVLWLRKDGELPESRATK
DMFDRRLRLSNISESDGGEYQCIAENSQGKTTHTYTVTVEAAPYWTKEPFSQLYAPGEDV
RLDCQADGIPTPTISWTINGMSLSETDEDPRRTVTSIGSLILNDVNFEDTAIYQCHASNK
HGTILTNTNVYVIELPPQILTEDELTYKFTEGQKALLECESFGSPKPKVTWESESTIEIL
ADPRVNLLTNGGLEIANVTYSDQDTYTCSVQHTNLSISAILEVINRTVILSPPQALKVQT
GNRANFTCLARVDPSLGLPLLQWRKNGQKLFESHSDEKYTFEGPALIIANVETEDQGIYT
CQVITNLDMAEASGTLTLIDRPDPPTLLQITEPKHRAVTLSWSPGDEHNSPVLEYVIEFE
DQGSKERGLEELMKVPGDKERVILPLQPYMSYRFWVIAINAVGKSDPSKPSEIYNTKAEA
PDNNPEDVRSESTDPDNLLITWKEMDKREFNGPDFKYRVLWRRVLGHGPSWHTHYTTAPP
FIVSGIGNFSAFEIKVQAVNEEGDGPEPDPTIGYSGEDVPLEAPIGVGVAILNSTAIRVT
WAAIERETVRGNLLGYKIHLTRTSSRGHHRGRRAREPEPSVVVETGANEERKVIGDLRPF
SHYDLAVRVFNSKGEGPLSEALSFKTDEGVPGPPSSLTLDSPSETEMTLHWTPPSQPNGI
LKGYLLQYQQVVESDDSPMQVETIEDSTVTHHTLRNLDRHSHYRFYLRGRTGAGDGEPIV
REGATTLDGVPPVNISLSVGETSVNLSWVAKKRHRNVRFQIHSINKNGSKSKKTEMVNSS
QSFYQLQGLTPGSQYHLLFTYNNTDFWDNVIKTEGTGVTEVQPSFATQGWFIGVVSAIVL
LLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLEVKLSESQA
SLGEESKLCSKDNLDFNSSSARTNDPNMYASLVSQFSQPSEDPETLQTLPDNSLLNSTTI
SPTTNGLPNAVTILD
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcgacagcaggttggcagtagggggcagtgctcctcccgccttctc
atcctcctcctcctttcccttgctgcccagctcagccatgcagccatacacataccctcc
aacttcaagatgcctccaatgatcaccacacagccagggtctgtcatcgtctttagtgtt
gaagaccttggcatgaattgcgaagcctctggcaaccctgcaccggttttccattggaca
aaggatggaaaggcgtttgacccaggcagtgacccagagctgaaggtttctaaagactcg
ggctcatttgtattctacacacgcagtaatactatggacaacctgaggcagtaccaaggc
aaatacgtatgctacgcatccaacgtgctgggaacagcagtctctaatgaggccagattc
accatggatgagcccccaactcagcagaaagaagaaaagattaaggtgaactctgaagag
ggaagcagtattgttctgaagtgtaaccccccacagagctctctggagcctatcattcac
tggatggactggaggctacatcatatcaagctaagtgagcgggtggtggtggggaaagat
ggaaacctatactttgctcatttgacaacagaggacagcagagatgactatatctgcaac
gttcagtaccttttaacccgcaccattctggcaaaggaacccaccattctgactgtcaac
ccctccaactcacttcggaacaggaggcccctcatgatgagacccgctggaatccacagc
tcttatgttgcccttaggggccagactttggagcttgagtgcattgtccaaggccttcca
acccccaaagtgttgtggctcaggaaagacggggagctgcctgaatctcgggccaccaaa
gatatgtttgaccgccgcctgcgcttgagtaatatctctgagagtgacggtggcgaatat
cagtgtatagctgaaaactctcaagggaagaccacacacacttacactgtgactgtagaa
gcggctccctactggaccaaagagccattcagtcagttgtatgccccaggtgaggatgtc
agactagactgccaggcagacggcatccccactcctactatcagctggaccatcaacggg
atgtccctctcagaaaccgatgaggaccccagacgtactgtgacgtcaattggatccctg
atcctaaatgatgtcaattttgaagacactgcaatctatcagtgccacgcctccaacaag
catggaaccatcctcaccaacaccaacgtatatgtcattgagctgcctccccagatcctc
actgaggatgagctcacatacaaatttacagaaggccagaaggctttactggagtgtgag
agctttggctctcctaaacctaaagtcacatgggagagcgaaagcaccatcgagattctg
gcagatcccagagttaacctgctcaccaacggggggcttgagattgctaatgtcacctac
agtgatcaggacacctatacctgctctgtgcagcataccaacttgtcaatcagtgcgatc
ctggaagtgatcaacaggacagtgatcctgtcaccaccacaggctctgaaggtgcagact
ggaaatagagcaaacttcacttgtctggccagagttgaccccagtcttggcctcccactc
cttcagtggagaaaaaatggtcagaagctgtttgagtcccacagtgatgaaaaatacaca
tttgaaggcccagccttgattatagctaatgtggaaacagaagatcaaggcatctacacc
tgtcaggtgatcacgaacctggacatggctgaagccagcggcaccctcactttaattgat
cgtccagacccccctaccctcctccagatcactgaacctaaacatcgtgctgtcaccctc
agctggagtcctggagatgaacacaacagccctgtgctagagtatgtgattgagtttgag
gaccaaggttccaaggagaggggtttggaagaactgatgaaagtacccggagacaaggag
cgtgttatcctccctctgcagccctacatgtcctaccgtttctgggtcattgccattaat
gccgtgggtaaaagcgatcccagcaagccatctgaaatctacaacacaaaggctgaagct
cctgacaataaccctgaagatgtgaggagcgaatccacagacccagacaacctactcatc
acttggaaggaaatggacaagcgtgaattcaatggacctgacttcaagtaccgggtgctg
tggaggcgagtactggggcatggacctagctggcatacacactacacaacagcaccacca
tttatcgtcagtggcattggcaacttttctgcctttgagatcaaagtgcaggctgttaat
gaggaaggggatggacctgaaccagaccccaccatcggctactcaggagaggatgtacca
ttggaggctcctataggtgtgggtgttgcaatactgaacagcactgccatcagggtgact
tgggcagcaatagagagagagacagtcagaggaaacctgctgggatacaagatccacttg
acaaggaccagctctaggggccaccaccgaggccgaagggccagggagccagagccctct
gtggtggtggagactggggccaacgaggaaaggaaggtgatcggtgatcttagaccattc
tcccactatgacctggctgtccgtgtatttaacagcaagggagaaggacccctctctgag
gcactgtccttcaagactgatgagggagttcctggtcctccctcatctctgacactggac
agcccatcagagacagaaatgaccctccactggacaccacctagtcagcccaatggaatc
ctcaaaggatatctactgcagtaccaacaggttgtggagagtgatgatagccccatgcag
gtggagacaatagaagactccacagtcacccaccacaccttaaggaacctggaccgacac
agccactaccgtttctatctgaggggtcgcactggtgctggcgatggagagcccatcgtg
agggagggtgccaccacactggatggagtgcctcctgtcaacatcagcctgtctgtagga
gaaacctcagttaaccttagctgggtggcaaagaagagacacaggaatgttagatttcag
atccactccatcaacaaaaatggcagtaaatcgaagaaaacagaaatggtgaactcctct
cagtctttttaccagcttcagggcctgacacctggctctcaatatcatctactcttcacc
tacaacaacactgatttctgggacaacgtcatcaagacagaaggaacaggagtgacagag
gtgcagccaagctttgcaacacagggttggttcattggcgttgtgagcgccatcgtgctg
ctgctgctgatactgctcatcctctgcttcatcaagaggagtaaaggggggaagtattca
gtgaaagataaagaagagggcccgatggactcagaagcacgacctatgaaggatgagacg
tttggagagtacagatctctagaaagtgaccttgaagtgaagctttcagagagccaggca
tccctgggtgaggagagcaagctgtgtagcaaggacaacctggatttcaacagcagcagt
gccaggaccaatgaccccaacatgtatgcatctctggtcagccagttcagccagcccagc
gaggacccagaaacactccagaccctgccagataactccctgctcaactccaccaccatc
tccccaaccaccaacggcctgcccaacgcagtcaccattctcgattaa
DBGET
integrated database retrieval system
