Scomber japonicus (chub mackerel): 128357165
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Entry
128357165 CDS
T09718
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128357165 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128357165 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357165 (her9)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128357165 (her9)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128357165 (her9)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
128357165 (her9)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
128357165
NCBI-ProteinID:
XP_053173391
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All DBs
Position
4:15467337..15469474
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AA seq
291 aa
AA seq
DB search
MPADTMEKQTASPIAGSPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRIQMSAALSADATVLSKYRAGFNECMNE
VTRFLSTSEGVNTEVRSRLLNHLSSCMSQMMSMNYPQQAPSQQAHLAQPLHVQLPSTLPI
SGAAMGSKLSPAEAVSPKVFGGFQLVPATDGQFAFLIPNPAFASATAPVIPLYANAGVPV
AVNASPVHGGSASTAASPIHGMTSFSGGSQAVSPVGVSTGSESNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacactatggaaaagcagacggcatcccctattgccggttcccctgcaaac
ggatcacacacaccggacaaaccgaaaaatgccagcgagcatagaaaatcatctaaaccc
attatggaaaaacgccgcagagcaagaattaacgaaagccttgggcagctgaagacactc
atcctggacgcacttaaaaaagacagctccagacactcaaagttggaaaaagcagacatc
ctggagatgacagtgaagcacttgaggaacctgcagcgcatacagatgagtgcagcactc
tcagcagatgccaccgtcctgagcaagtacagagccggattcaacgagtgcatgaacgag
gtcacccgcttcctgtccacctcagagggggtgaacacggaggtgaggtcgaggctcctc
aaccacctgtccagctgcatgagccagatgatgtccatgaactatccgcaacaggccccg
tcccagcaggcgcacctggcgcagcccctccatgtgcagctcccatccactctgcccatc
agtggcgccgccatgggctccaaactcagccctgccgaggctgtctccccgaaggtcttt
ggtggttttcagctggtgcctgcaaccgatggacagttcgcttttttgatccctaacccg
gcctttgcctccgccacagctcctgttatccctctttacgcaaacgcaggagtgcctgtt
gcagttaacgccagcccagtgcacggcggttcggcatcgactgcagcatctccaatccac
ggcatgacgtccttctctggagggtcccaggcggtcagcccggttggggtcagcaccggc
tcggagagcaacgagcctgtgtggcggccttggtag
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