Scomber japonicus (chub mackerel): 128357172
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Entry
128357172 CDS
T09718
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128357172 (cdh15)
04519 Cadherin signaling
128357172 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128357172 (cdh15)
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Major cadherins
128357172 (cdh15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
RibLong
Motif
Other DBs
NCBI-GeneID:
128357172
NCBI-ProteinID:
XP_053173404
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All DBs
Position
1:complement(25255570..25264063)
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AA seq
758 aa
AA seq
DB search
MVRMKRDWIIPPIRVLENSKHVPEDLVQIKSDKIFTGEVIYKLEGPGVDQDPKNLFEIDD
KSGVIRSKRPLDREKDRSFTLKAFALSPSGERLENPTTIEIVVLDQNDNRPAFTQKQFNG
AVLEFSVPGTSVMSVSATDADDPMTDNAHLSYSIISQESIPANAVTKTMFGINNQTGAIY
TRDVGLDREVVKSFRLKLQVADMGGMGLTSEGVAIIDVSDINNNAPQFSPASYSMTAVEN
LKEYEVGRVNVTDKDDRGTGNWEAKYFISNDPHGNFAITTDPDTNQGVLMVVKPLDYETQ
KEYTLILKVENINRLDKAPNLPVSTATVVVTVVNENEAPRFKENPIKIVVPESVVPGTIL
KHNIALDPDNSELRYEISRDPERWLDINRNTGDIIAKKSFNMRSPHVKNNIYNAVVKVTG
QYADGLSTTATVVITLKETNDYPPQLFPLSGSVCRNAGRASSGLVLTAVDEDLSPHAAPF
IFEMTDDASNNWTVIHVNDTHSLLQPVLELEPGEYAVTMLVSDSGSPVLSAYAQVNVTVC
LCDSFGDCKSEAGAIFGSSVGISFFALIIIMVCFALLLLLLLLAVAVTTCGRRHHIKKGT
GLLVGDSEDDIRDNVLNYDEQGGGEEDENAFNIDLLWNPLEAPSTPGSYCPMPGVPRGKQ
PLRRDAPHNLPSPTYPRRPPADPTDIEDYINDGLEAADNDPNVPPYDTALIYDYEGEGSL
AGSLSSIASSSSDGDQDYDYLNDWGPRFQKLANMYDPR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggatgaaaagggactggatcatccctccaatcagagtgctggagaatagcaag
catgttccagaagacctcgtccagatcaaatcagacaaaatcttcacaggtgaggtgatc
tacaagttggaaggaccaggggtggaccaggatccaaagaatttgtttgagattgatgac
aaatcaggagtaatcaggagcaagcggccactggacagagagaaagaccgtagcttcacg
ctgaaagcttttgcactgtccccaagtggagagagactagagaatccgaccaccatagag
atagttgtgctggatcagaatgacaacagacctgccttcacccagaagcagttcaatggt
gccgtcttggagttctctgttccaggcacgtcagtgatgtcagtgtcagccactgatgca
gatgacccaatgaccgataatgctcatctgagctactctatcatcagccaggagagcatc
cctgccaacgctgttactaagactatgtttggtatcaacaaccagactggggccatctac
acaagagatgtaggcctggatcgagaggtggtgaaaagtttccgattaaaactacaggtt
gctgatatgggaggcatggggctaacaagtgaaggtgtggcaatcatagatgtatctgac
atcaacaataacgccccacagttcagccctgcttcgtacagtatgacagcagtggagaac
ttgaaggaatatgaggttggtcgggtgaacgtgacggacaaagatgatcgtggaacagga
aactgggaggccaaatacttcatttctaatgaccctcatggaaactttgctatcactaca
gatcctgacaccaaccagggtgttttgatggtggtgaagcctttggattatgaaacacag
aaagagtacaccctgattctgaaggtggaaaatatcaatcgtctagacaaggccccaaac
ctgccagtgagcactgctactgtggtggtgactgttgtgaacgagaatgaagctccacgt
ttcaaagagaaccccataaagatcgtggtccctgagtctgtggttcctggaacaattctg
aaacacaatattgcccttgaccctgataattctgagctgaggtatgaaattagcagagat
cctgagaggtggctggacatcaacagaaatactggagacattatcgccaagaaaagcttt
aacatgcgatctccacatgttaaaaacaatatctacaatgctgtggtcaaggttacaggt
cagtatgctgatggtctgtcaactacagccacagtggtcatcacactgaaggagaccaat
gactacccacctcagctcttccctttgagtggctctgtatgcaggaatgcaggccgggcg
agttctggtctggttctgactgctgtggatgaagacctttctccacatgctgcacctttt
atctttgaaatgactgatgacgcgtcaaacaactggactgttattcatgtcaacgataca
cactcactgcttcagccagtcttagagctggagccaggagagtatgcagtcacaatgttg
gtgtcggactctgggagtccagttctcagtgcttatgctcaggtcaatgtcactgtgtgt
ctctgtgactccttcggtgattgcaaatctgaggcaggggcgatctttggctccagtgtg
ggaatcagcttctttgctctcatcatcatcatggtctgttttgcccttctactgttgcta
ctcctcctggctgtggcggtgaccacttgtgggagacgccatcatatcaagaaaggaaca
ggtctgcttgttggagattcagaggatgacatacgtgataatgtcctcaactatgatgag
caaggagggggtgaggaagatgagaatgccttcaacatcgacctgctgtggaatcccctc
gaagctccttcgaccccggggtcctactgtccaatgcctggtgttcctcgaggcaagcag
cccctcaggagggatgccccccacaacctgccttccccaacctacccacggaggcctcct
gcagatcctactgacattgaggactacatcaatgatggcctggaggccgcagacaatgat
cctaacgtacctccctatgacacagccctgatctatgactatgagggagagggctcactg
gcaggcagcctcagctccattgcttcaagcagctctgatggagaccaggactacgactac
ctcaacgactggggaccacgctttcagaaactggccaacatgtatgatccacgttaa
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