Scomber japonicus (chub mackerel): 128357174
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Entry
128357174 CDS
T09718
Symbol
arhgef10lb
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128357174 (arhgef10lb)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128357174 (arhgef10lb)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128357174 (arhgef10lb)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128357174 (arhgef10lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
CFAP43_N
DUF7675
IQ_SEC7_PH
BBS2_Mid
Beta-prop_EML_2
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
128357174
NCBI-ProteinID:
XP_053173405
LinkDB
All DBs
Position
4:383227..410808
Genome browser
AA seq
1038 aa
AA seq
DB search
MKTARNGTRDGLEETKLSMMRKVSFLQRKDFTGEGKDDAGYMDVSVCEIKHPPPQLCPVP
EGLSSQQIVRRLILGSIVQSESSYLDSLKRILQEYHRPLQESQNWILNPKKVHQIFYRLQ
EIYQCHSMFQIALASRVAEWDHSEKIGDLFVASFSKSMVLNVYSDYINNFTNAMALIKKA
CVSKPAFLDFLKKKQASSPDRITLYGLMVKPIQRFPQFILLLQDMLKSTPKSHTDRLPLQ
LALTELETLAKKLNEQKRLADQEAEIQLLAHSAGDRNLNKLLNSQQRQLIQCELLTEVVY
GEKGQIVKSKERKVFLLNDTVICANVNLKXVPHRGPPDISSLVPVGPKYSVKWCTPLLQT
EVMEVGQDSLQSKDSVVTARRRSPAFSPAGKVFLGPPRLYQELEELQHDLAVVEEVSLLV
GTLTGTYQNLNSTVSQDWCLALNRLIRLKEEEIQNANKCRLRLSVPGKPDRSGRPVSVMV
VFNTPSPISKISWVNRLHIAKIALREENTPGWEYAEEDEKTKSPLSCPLLTGRLPVFSSK
THTLKLEAALHSPSQSSLLGFCTASTCLPQGYLWVAGGGGSSNHGHVEIFSLNRAIPRPV
KSIPLRAPVLCVEYVKEPCHITEEKEAERAHSAAKIGNIICVGLQDGSIHVYSTVDTSVQ
CLLILAIDSCPVLCIKHSLSFLFAGLANGKVAVYHTKTGERLWDMNSCRLVSLGSDPVFS
LLTLEDTVWASCANQVTVIQGSSLLSQSFEAHSDPGCKVSHMVHSGGGVWMAFTQGSSIH
LFHTETLEPLQEINISTRTAHLTPGKVCVSSLLTCQGLLWVGTSQGIILTFPVPTLEGIP
KITGKGMTSLNAHCGPVDFLVSTSCTLASDVLRRDSIFNGGEEGTNGEERSGTGGDKETQ
RIQQFNSSHGSEAFLPKEEKPKRLLLQYRLRSTCQLPGKLLTAQSDEGNPRAATDSLEHS
PEDGSIYEVNEDPDVWVRGRPVEVGKEGDSRRSKVTSTAIFSGGRGHRRIGQTASADTSS
DPSENTLLVWQLPLTLSQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcgaggaatggtaccagggacggtttagaagagacaaagttatccatgatg
cgtaaagtgtctttcctgcagagaaaagacttcacaggtgaaggaaaggacgatgcaggt
tacatggatgtgtctgtgtgtgagataaaacaccctccaccacaactctgccccgtgcca
gaggggctcagcagtcagcagattgtcagacgcctcatccttggctccattgtgcagagt
gagagcagctacctggactctctcaagagaatcctgcaggagtaccatagacctttgcag
gagtcacagaactggatcttaaaccccaagaaggtgcatcagatattttaccgtctgcag
gagatctatcagtgtcactccatgttccagatcgctctggcatcacgcgtggctgagtgg
gatcacagcgagaagatcggagacctgtttgtggcctcgttttccaagtccatggtgctg
aatgtgtacagtgattacatcaacaacttcactaacgccatggcgctcatcaagaaggcc
tgcgtgtctaaacctgctttcctggactttctgaagaagaagcaggcgtccagtccagac
aggatcacactgtacggtctgatggtgaaacctattcaacgctttcctcagttcattctg
ctgctgcaggacatgttgaagagcacaccaaagtcccacactgaccgtctgcctctgcag
ctggctctcaccgagctggagacgttggctaagaaactgaatgaacagaagcgtctggct
gaccaggaagctgagatccagctgctggcacacagcgcaggagaccgcaacctcaacaag
ttgttgaactctcagcagaggcagctgatccagtgtgagctgctgactgaagtcgtttac
ggtgaaaaaggtcaaattgtcaagtctaaggagaggaaggtgttcctcctcaatgacacg
gtgatctgtgctaatgtcaacctcaagtaagtacctcacaggggtcccccagacatcagc
agcctggtccccgttggtcctaagtactcagtgaagtggtgcactcctctgctgcagacg
gaggtgatggaggtgggacaggacagtctgcagagcaaagacagcgtagtcacagccaga
cgacgcagccccgccttcagccccgccggtaaagtgttcctgggtcctcccagattgtac
caagagctggaggagctgcagcatgacctggctgtggtggaggaggtgtcactgctggtg
ggaacactcactggaacctaccagaatctgaacagcacagtgtctcaggactggtgtctt
gccctgaacaggctcatccgtctgaaggaggaggagatccagaacgccaacaagtgtcgc
ctgcgtctgtctgtcccaggaaaacctgacaggtctggtcgtccagtgagcgtcatggtg
gtcttcaacactcctagccccatcagtaagatctcctgggtgaaccggcttcacatcgcc
aagattgctctgagggaagaaaacactccagggtgggaatatgctgaagaagatgaaaag
actaaatctccactcagttgtccattgttgactggaagacttcctgttttctcctccaaa
acacacacactgaagctggaggcagctcttcacagtccttctcagtccagcctgcttggt
ttctgcactgccagtacgtgtttaccacagggttacctctgggttgcaggtggaggaggc
agctccaaccacggccacgtagagatcttctccctgaaccgagccatcccccggccggtc
aagagtatcccactgagggctccggtcctgtgtgtggagtatgtgaaggagccatgtcac
atcacagaggagaaggaggctgagagagctcacagtgcagccaagataggaaacatcatc
tgcgttggtctgcaggatggcagcatccatgtgtacagcactgtggacacatctgttcag
tgcctgctgatcttggcgatagacagctgtccagttctctgcatcaaacattcactgtcc
ttcctctttgctggactggccaacggtaaagtagcggtgtaccacacaaagactggagag
agactgtgggacatgaactcatgtaggttggtgtctctgggatctgatccggtcttcagt
ctattgactcttgaagacactgtatgggccagctgtgcaaaccaagtcacagtcatccaa
ggatccagcctcctcagccagagctttgaagcccactctgatccaggctgcaaggtcagc
catatggttcattcaggtgggggggtttggatggctttcacccaggggtcctccattcac
ctgtttcacacggagaccttggaaccgctgcaggaaatcaacatctccacccgcaccgcc
catctgacaccaggcaaggtttgtgtctccagtttgctgacctgccagggtctgctgtgg
gtggggaccagccagggcatcatcctcaccttccctgtacccaccctagagggtatcccc
aagatcacaggtaaagggatgacgtctctgaatgctcactgtggtccagttgacttcctg
gtgtcaacttcctgcactctggcctctgatgtgctcagacgggactccatattcaacgga
ggtgaggagggcactaacggagaagaacgaagtgggacgggaggagataaagaaacacag
agaatacagcagttcaactcctcccatggctcagaggcttttttaccaaaggaggagaag
cccaagcgtctcctgctacagtaccgccttcgctccacctgccaactgcccgggaagctg
ctgacagcccagtcagatgagggcaacccaagagccgccacagattctctagagcacagc
ccagaggacggctccatctacgaagtgaacgaggaccctgacgtgtgggtgaggggacgg
cctgtggaggtggggaaggagggggattccaggcgcagcaaagtcacctcaacagctatc
ttctctggaggcagaggacaccgcaggataggacagacagcctcagcagataccagctca
gaccccagtgaaaacactctgctagtatggcagctgcctttaactctcagccaatga
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