Scomber japonicus (chub mackerel): 128357209
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Entry
128357209 CDS
T09718
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128357209
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
128357209
NCBI-ProteinID:
XP_053173455
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All DBs
Position
4:21991630..22082134
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AA seq
1607 aa
AA seq
DB search
MSKVIQKKNHWITKVNECAIVRDACGELNVELRGGAENGEFPFVGQVREDAVVYQDGKLS
EGELLLEVEGLPVSGLPLYDILSVINCCQGPIRLKTVRQGHKLNKDLKYYLSLRFQKSSP
DHELQKTIRANLYRHAVPCTTRPPREGEVPGVDYNFLSVEDFLELEESGTLLEIGTYDGN
YYGTPKPPRQPIIGTVILSDAGSQQSTPKRTKSYNDMQNARVVPADDDDDDQASEMNNSF
TGNPNEQDESRGGILRPYPARDNAPSCGLNNAATSTSESGQQTLAEPQVSPEDPLGPLPE
NWEMAYTENGELYFIDTAKAHHQDMAVYFQSFHNTKTTSWLDPRCRDKASRPLEECEDDE
EGIHTEDLETDLELPPGWERIDDPVYGVYYVDHINRKTQYENPVVEARRRKILEQQQPQP
PEGERYIREWIEEHSSAAAPLANYAPNHLETYRDPQVPPSLPPGPAGAKRGKPFFTRNPA
ELKGIFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVND
TIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDKEPIIVN
GQETFDSPSNQAGSVNGMREPRAHSPSAEVASNGSHGYSSDVVTLASSIATQPELITIHM
EKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKEGDILMEVNKRNVQNMSHNQVVDLL
SKCPRGSEVTMLVQRGVVPAKRSPKLVHQLERKDSQSSSQHSVCSHRSTHTDSPSHPPSV
MPSEAVAPTPAAPTQPLPGLPPQDSADGTLTLQKKPDPFKIWAQSRSMYESRLPDCQEQD
IFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSH
QLVVQLMQQAAKQGHVNLTVRRKSTGYGVSKGEGDVPPSPASSHHSSTQAPSLTEGKRTP
QGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPASLQPYDVEIQRRENEGFGFVIVSSV
SRPDAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVN
LIKEAGNTVSLRIIPGDDSSNASLLTNAEKIATITTTHTPQQSTESRNNSKSKGAPPPPP
IQTQSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDGAAVRNGKMRVGDEIL
EINGESTKNMKHSRAIELIKNGGRRARLVLKRGDGSVPEYDGSSDGNPSTPGAQNTPEVR
TLPPNSRYHTSLESSYPPDLHKSSRQESARGRDRDRNWDRAVSDQMDYQGRQLNPHHHHT
WNNNHSQSTPRQQSPENSNSSSSGNKKSRGRKVKKSESESGISKLLKTLRKDSSGKKAAA
AEKLRGRELSSSSSTLDGRFRPQRRGSLDRSPTRKCTSSPDRRRAKSMDRRAERAHRDRT
PEREYDDGGFLAVTPERKFYERRLLKDSQMAGRVREATTPEHTNNNGDSLSLSRGRTYDR
ATKNGNLLRDSSSERREEQYRMNGTPERRYRVERDSSPDSNYSRDELNYAAAPRLKDYYS
MMKNNAAHNNAAYNNTGHNNNTVGRSPNQLPEPKRRLYKESPKDLSI
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcattcagaagaagaaccactggatcaccaaagtgaacgagtgcgcaatt
gtccgggacgcgtgtggagagttgaatgtggaattgcgcggcggagctgagaatggagag
tttcctttcgtcgggcaagttagagaggatgctgtggtttaccaggacggtaaactcagc
gagggggaactactcctggaagttgaggggctgcctgtgtctggattacccctctatgac
attttaagtgtgattaattgctgccaagggcccatcaggttgaaaactgtgcgtcaaggt
cacaagctcaacaaagacctgaagtactacctgagtttgagatttcaaaagtcttccccc
gaccacgagctgcagaagacaatccgagccaatctgtatcgccatgctgtgccttgtacc
acccgccccccacgagaaggagaggtcccaggggtggattataactttctgtctgtggag
gatttccttgaacttgaggagagtggcacactactggaaataggaacgtatgacggtaac
tattatgggacccccaagccgccaaggcagcccatcattgggacagtgattctcagtgat
gcaggctcccagcagtccaccccaaagcgcacaaagtcctacaatgacatgcaaaacgcc
agagtagtgcctgctgacgacgacgatgacgaccaggcctcggaaatgaacaacagtttt
acaggtaaccctaacgaacaggatgagagccgcggcggcatcctccggccgtaccccgca
cgtgacaatgctccatcctgtggtctgaacaatgcggccacctccacctcagaaagtggg
cagcagaccctggcagaaccacaggtctctccagaagacccgctggggccgctgcctgaa
aactgggagatggcctacaccgagaatggagaactttacttcatagacacagcaaaggca
caccaccaggacatggctgtgtattttcagagcttccacaacacaaagactacatcatgg
ctggatcctcggtgtagagacaaagcctcgaggcctctggaagagtgtgaagacgatgaa
gaagggatacatacagaggacctggagaccgatctagagctgcctccaggatgggagagg
atagacgacccagtgtatggagtgtactatgtagatcatataaacagaaagacccagtat
gagaacccagtggtggaggcgcggcgtcggaaaatcctggagcagcagcagccgcagcct
ccagaaggtgagcggtatattcgagaatggatagaggagcactcctcagcagccgctcca
ctagcaaactatgctccaaaccacctggagacctacagagaccctcaggtcccaccatct
ctacctcctggccctgcaggagccaaacgagggaagcctttcttcacaagaaacccagca
gagctgaaaggaatcttcatcaacaccaagctgaagaagagtcgtcgaggctttggcttc
accgtggtcggaggggacgagccagatgagtttctacagatcaagagtctggtgctggac
gggcctgcggcagtggatggcaagatggagacaggtgatgtgatagtcagtgtcaatgac
accatcgtgctgggctacacccacgctcaggtggtgaagatcttccaatccatccccatt
ggttccatggtggacttggccttatgccgtggctacccactgccctttgaccctgatgac
cccaacaccagcctggtgacctcagtggccatcttggacaaggaacctatcattgtcaac
ggacaggaaacgtttgactcaccttccaaccaggctggatccgttaacggcatgagggag
ccgcgggcgcacagcccctcagctgaggtggcatccaatggctcacatggctactccagc
gatgtggtcaccctggcctcatccatagccacccagccagagctgatcaccattcacatg
gagaagggagacaaaggattcggcttcaccattgctgacagcctgacgggaggcgggcag
agggtcaagcagatagtggactatccacgctgccgtgggctaaaggagggggacattctg
atggaggtcaacaagagaaatgtccaaaacatgagccacaaccaggtggtggacctgcta
agcaaatgtccccgaggcagtgaggtcaccatgctggtgcaaagaggagtggtgccagcc
aagaggagtccaaagctggtgcaccagttagagaggaaagacagccagagtagctcccag
cacagtgtgtgcagccatcgcagcacccacaccgattctcccagccacccaccctctgtc
atgcccagtgaagctgtggcgcccactcctgctgcccccacccagcctctgccaggcctg
ccccctcaggactctgcagatggcaccctcacccttcagaagaagccagacccttttaag
atctgggcccagtccaggagcatgtacgagagtcgactgccagattgccaggagcaggac
attttcctttggcggaaggacacaggcttcggcttccgtatcctgggaggaaatgagcct
ggggagcctatctacataggacacatagtgaagtacggggctgcagacgaggatgggcgc
ctgcggtcgggcgatgagctcatctgtgtggacggcacagcagtggtgggcaagtcccac
cagctggtggtgcaactgatgcagcaggccgctaaacagggccatgtcaacctcactgtc
agacgcaagtctactggatatggagtgtcaaaaggggaaggtgatgttcccccgtcacca
gcctcctcccaccacagcagcacgcaggcacccagccttacagagggaaagcggaccccc
caggggagccagaactctctcaacaccgtcagttctgggagcggatccaccagcggcatc
ggcagtggtggtggaggaggcagcgggagcgcagtggtacctgcctccctgcagccatat
gatgtggagatccagcgtagagagaacgagggctttggttttgtcattgtgtcgtctgtt
tccaggcctgacgccggcaccacctttgctggaaatgcttgtgtggccatgccccacaaa
ataggacgaatcatagagggcagcccggcggatcgctgcgggaagctgaaagtcggggac
cgaatattggctgtgaacggctgctccatcacaaacaagtcacactcggacatcgtcaac
ctgatcaaggaagccgggaacacagtttcgctcaggatcatcccgggtgatgattcttcc
aatgcttctctactcaccaatgctgagaagatagctactatcaccaccacacacacacct
caacagtccacagagtcccggaataactcgaagtctaaaggagctcctcctccaccaccc
atacaaacccaatcacaggatgcagagttctactctgtggacctcgagcgtgacagtaaa
ggttttggtttcagtctgagaggaggaagggagtacaatatggacctttatgtgttgaga
ctagcagaggatggggctgctgtcagaaatggcaagatgagggtaggggatgagattctg
gaaattaatggtgagagcacaaagaacatgaagcattcacgtgccattgaactgatcaag
aatggtggtcggagggcaagactcgtcctcaaacggggggatggatctgtacctgaatat
gacggcagcagtgacgggaacccttccacacccggggcacaaaacactccggaagtgaga
acgctgccacccaacagccgatatcacacctcattggagtccagttatccaccagacctt
cacaaatcatcacgccaggagtctgcgcgtggccgagacagggacaggaactgggacagg
gctgtgtcagatcagatggactaccaaggccggcaattaaacccccaccatcatcacacc
tggaataataatcacagtcaaagtacccccagacagcagtctccagagaacagtaacagc
agtagcagtggcaacaagaagagccgaggccgcaaagtcaagaagtctgagtcggagagc
ggcatctctaaactcctaaagactctgaggaaagacagctcagggaagaaggctgcagct
gcagagaaactgaggggccgagagctctcaagcagcagttctactctggacgggaggttt
cgtccccagcgccgaggctcccttgaccgctcaccaacccgcaagtgcacctcctcccct
gatcgtcggcgggccaagtcgatggaccgcagggcagagcgagcgcatcgggaccgtaca
cctgagagggagtatgacgatggagggttcctcgctgtcacccctgaacgcaaattttac
gagcgaaggctcctcaaggactcgcagatggctgggcgagtcagggaggccacaaccccc
gagcacaccaacaacaacggagattcattgtctctttccaggggccgtacgtatgataga
gccacaaagaacggcaacctcctgagagactcttcctcagagaggagggaggagcagtat
cggatgaacgggacaccggagagacgatacagagtggagcgggactcttcccctgacagc
aactacagtcgggatgagctgaactatgcagcagcacccagactaaaggactactatagc
atgatgaagaacaacgctgcacacaacaatgctgcctacaataacacaggccataacaat
aacacagtaggccgtagcccaaaccagctccctgagcccaagagaaggctgtacaaagaa
agccccaaagacctcagcatctag
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