Scomber japonicus (chub mackerel): 128357212
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Entry
128357212 CDS
T09718
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128357212 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128357212 (fmodb)
Proteoglycans [BR:
sjo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
128357212 (fmodb)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
LRR_14
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
128357212
NCBI-ProteinID:
XP_053173468
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Position
4:21948082..21950493
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AA seq
347 aa
AA seq
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MRTVVLLLIMGIVDLSFGQRYSQLQWLSHLRGRRWHASWQAEDVDCPLECDCPSTYPTAM
YCHSRNLQHVPYVPSHVKYVYLQGNQITGIQDGVFDNATSLVWVVLFHNQLNSDKIGKNV
FSKLKNLDRLFLDHNELTRVPPNLPKSITELRLGHNKISKILSNTFEGMANLTSLKLQAN
DLEDIGGVFKGLKSLTLLDMRKNKLRKIPDNLPERLQQLYLEFNNIESVPTGFLTMYPKL
KFIRLAHNKLTDKGLPSNVFNISTLVELDLSFNKLEKIPIVSRNLENLYLQANKIKEFSL
SSFCGHERDMTNFSQLRMLRLDANEISAKDIPAEAAYCLRRAAFIDV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcggacagtggtgctcctcctcataatgggaatagtggatctgagctttggccaacgt
tacagccagttgcagtggttgtcccatctgcgaggacggcggtggcatgcaagctggcag
gctgaagacgtggactgccccctggagtgcgactgcccctcaacctacccaacagcgatg
tactgtcacagccgcaaccttcagcatgttccctacgttccctcacatgtaaagtacgtc
tacctgcagggtaaccagatcacaggcatccaggatggcgtgtttgacaacgccaccagc
ttagtctgggttgttttattccacaaccagctcaactcagacaagatcggcaagaatgtc
ttcagcaagctcaagaacctggaccgactgttcttggatcacaacgagctgacccgtgtt
cctcccaacttgcctaagtctataacagaactgcggcttggtcacaacaagatctcaaaa
atcctgtccaacacattcgaggggatggccaacctcaccagtcttaagctccaagcaaac
gacttagaggacattggaggtgtgttcaagggactgaagtctctgaccctgctggatatg
aggaaaaacaagctcaggaaaatccctgataacctccccgagaggctgcagcagctatac
ctggagtttaataacattgagagtgtgccgacgggcttcctcaccatgtatcccaaactg
aagtttatccggttagctcacaacaagttgactgataaaggactgccctcaaatgtcttc
aatataagcacgctggttgagctagacctttccttcaataaactggagaagatccccatt
gtcagtaggaacctggagaacctttatttacaagccaataagatcaaagagttctccttg
agcagtttctgtggacacgagagagacatgacaaacttctcccagctaagaatgctgcgt
ttggatgccaatgagatcagtgccaaagacattcctgctgaagctgcctactgtttgcgg
cgtgctgcctttatcgacgtgtaa
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