Scomber japonicus (chub mackerel): 128357234
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Entry
128357234 CDS
T09718
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128357234 (smc5)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
128357234 (smc5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
FtsK_SpoIIIE
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
128357234
NCBI-ProteinID:
XP_053173495
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Position
4:complement(16498341..16508401)
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AA seq
1078 aa
AA seq
DB search
MSEPRKRPRVSHDSTANQTSSQRGANMLPGSQRPGAEEGEHFVEGSILRITMKNFLTYDY
SVVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGRTKGSIEIE
LHKNDGNVIINREIHVENNQSLWMLNGRHCNQKAVEEEVKALCIQVSNLCQFLPQEKVGE
FAKMSKIELLEATEKSVGPPEMYEYHCELKNFRKKERELENVVKEKASFLEKAKQRNERN
KHDVNRYYEKKRHLDVIELLGKKKPWVEYETTRKELEGVKKERDEAKRQLSALKQAQAPM
LRKIQLIENQLKPTEAQIKAKTTAIKEASLMCKQKQDQLDRKHKEIEDIKQRLRLKQMEK
EDHQKRINNTRRTIEDLKAELGKIGDQPDVTPRINAVNVELRRIQEERAKIEGEKADLRR
EKDNLCAESRMLEKKLRDMNNMMNAKEEKLRGRHRDTHTALQWLRQNKHMFEGNVHEPMM
LVINVKDPRYAKYVENHISFHDLRAFVFQKKEDMEKFMVEVRDKKNLRVNSISAPEDSCS
GRPPSRNVESLKRFGFFTYLREMFDAPDEVMSYLCHQYRVHDVPVGNEKTKSMIKTVIEE
PYLKVFYTTEERYTLKRSFYSNKISTSNSAVHNSQYLTITVDAVEKQKLEQQMKDCELKL
REIDERMKALQKQASTLDRSENELLAEKKKLSELKGKKRQLEQKISTKEDSLKQMEQSGI
DLRKIEEETKVKIAAINSDKVSIVAAFMAQMKLRAKLTMEKVYLALETVGLTAEKTKLEN
DCREGASELKTTDQKCGRLEHRKVQLTEQCKGLLKTAKSICRMQSDETLPEDLRNAFSNL
PDTLDELDAMLNEERARAECFTGLSESVVDEYNRREQEIKHLEKELEDKNNALNDYRQNI
SEAKERWLNPLKQLVEQINVKFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFHSST
QLHELTAYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFDIVVQTA
CKETTSQYFFITPKLLQNLQYADEMTVLCVHNGSHMLPPSKWDEKAFVRKCLQRKARA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcccaggaagagaccccgggtcagtcatgacagcaccgccaatcagacctcc
agtcagcgcggagccaacatgctgcctggcagtcagcggcccggagctgaagaaggggag
cattttgtggaggggtccatcctccgcatcaccatgaaaaacttcctgacctatgactac
tctgtggtgtatcctggacctaacctgaacatgattgttggagccaatggaactggcaag
tccagcattgtgtgtgccatctgtctgggtctggctggcaaaactgctatcctgggcaga
ggggacaaggttggcctctatgtgaaacgcggccgcactaaaggatctattgagattgaa
ctgcacaagaacgatggaaatgtaataattaacagagagatccatgtggagaataaccag
tctctctggatgctgaatggacgacactgcaaccagaaagcagtggaagaggaggtcaaa
gctctctgtatccaagtcagcaacctttgccagtttctgcctcaggaaaaagtgggagag
tttgccaagatgtccaaaattgagttgctggaggcaactgagaagtcagtggggccacca
gagatgtatgaataccactgtgagctcaaaaacttccgcaagaaagagcgagaactggag
aacgttgtgaaggagaaggccagcttcttagagaaggccaagcagaggaacgagaggaac
aaacatgatgtgaaccgttactatgaaaagaagagacatctggacgtgattgagttgctg
gggaagaagaaaccatgggtggagtatgagaccacccgtaaggagcttgagggagtgaag
aaggagcgagacgaggccaaaaggcagctttctgccctgaagcaggcccaggcgcccatg
ctgagaaagatccagctgattgaaaaccagctgaagcccactgaggcacaaataaaggca
aagactactgccattaaagaagcgtctctgatgtgcaaacagaaacaagatcagttggat
cgaaaacacaaagagatcgaagatattaaacaaaggctgagactgaagcagatggagaag
gaagaccaccagaagcgaatcaacaacaccagacggaccattgaagacttgaaggcagag
ctcggcaaaattggtgaccaaccagatgtcacaccgaggatcaatgccgtcaatgtcgag
ctgaggcgcatccaggaagagagggccaagatcgaaggagagaaggccgacctacgcagg
gagaaggacaacctctgtgctgagtccagaatgttggagaaaaagctcagagacatgaac
aacatgatgaatgccaaagaggaaaagctgcggggacgccacagagacacacacaccgcc
ctgcagtggctcaggcagaacaaacatatgtttgaaggaaacgtccatgagcccatgatg
cttgtgatcaatgtaaaagatcctcgatatgccaagtacgttgagaaccacatctcattc
catgacctgcgggcgtttgttttccagaagaaagaggacatggagaagttcatggtcgag
gtccgtgacaagaagaacttgagggtgaactccatttctgctccagaggactcgtgttct
gggcgacctccatcccgaaacgtcgagtcattgaaacgtttcgggtttttcacctacctc
cgtgagatgtttgatgcccctgacgaggtgatgagttacctctgtcaccagtacagggta
catgatgtcccagtgggcaatgagaaaaccaaatccatgataaaaacggtgatcgaggag
ccttacctcaaggttttttacacaacagaggagagatacactttgaagaggtccttttac
tccaacaagataagcaccagtaactctgcagtgcacaattcccagtacctcaccatcact
gtggatgctgtggagaagcagaagctggagcagcagatgaaggactgtgaattaaagtta
cgagagatcgatgagcggatgaaggctctgcagaagcaagccagcacattggatcgcagt
gaaaacgaattgctggcagagaagaagaagctatccgagctaaagggcaaaaagaggcaa
ctggagcagaaaatcagtaccaaagaggacagtttgaagcagatggagcagagtggcatt
gacctgaggaaaattgaagaggagactaaagtgaaaattgcagctatcaactctgataag
gtgtccatagtcgctgcattcatggcccagatgaagctgagagccaagctgactatggag
aaagtgtacctggctctggagacggtggggcttacagctgagaagaccaaactggagaac
gattgtagagaaggcgcttctgaactcaaaaccactgatcaaaaatgcggtcgtctcgag
cacaggaaggtccagctgacagaacaatgcaaaggcctgttgaagacagcgaagtcaatt
tgtaggatgcagtctgatgagacattacctgaagacctgcgtaatgctttcagcaacctg
cctgacacgctggatgagctcgatgccatgctgaatgaagagcgggccagagccgagtgc
ttcacaggcctcagtgaaagtgttgttgacgagtacaacagaagagaacaggagatcaaa
catctagagaaggagctggaagacaagaacaatgccctgaatgactacagacagaacata
tcagaggctaaggaacgctggctaaaccctctgaagcagctggtggaacagatcaatgtc
aagttcagtgatttcttccgctccatgcagtgtgcaggagaggttgatctgcactcagag
aatgaggaggaatatgacaagtatgggatccgcattcgggttaagtttcacagcagcact
caacttcacgagctgacggcctaccatcagagtggaggagagcgcagtgtctccaccatg
ctgtacctcatggccctgcaggagctcaaccgctgccccttcagagtggtggatgagatc
aaccagggaatggatcctatcaatgaaagaagagtctttgacatcgtcgtccaaacagcc
tgcaaagagacaacatcccagtacttcttcataactcccaaattgctgcagaatcttcag
tatgctgatgagatgacggttctctgcgtccataacggctcacacatgcttccccccagc
aaatgggacgagaaggctttcgtcagaaagtgcctccaaagaaaagccagagcatga
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