Scomber japonicus (chub mackerel): 128357242
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Entry
128357242 CDS
T09718
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128357242
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
General mRNP proteins
128357242
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
128357242
NCBI-ProteinID:
XP_053173505
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Position
4:complement(21836112..21843837)
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AA seq
498 aa
AA seq
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MADDFDVEDLLEAPYRKDEIKSSHANGHDDQHKKKRRSRSRSRSPGSRKKRSRSKDKKKG
KKRSKSRERKRSRSKERHRSRSRSKERSGRYRARRSPVRKRSKSRSPFRKEKSPIRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVE
ASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITE
EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFSDAECAKKALEQLNGFELAGRPMKV
GHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTG
SIPFGNIAATTAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQSENDPSWAIEIQDDVIE
ECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYH
NLFPDSVTAKQLLMPARR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggacctgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaacggacatgacgaccaacacaagaagaaaaggaggagccgaagc
aggagccggagcccaggctctaggaagaaaagaagcagaagcaaagacaaaaagaagggc
aagaagaggagcaagagcagggagagaaaacgaagccgcagtaaagagcgtcaccgcagc
cgctcccgaagcaaggaacgttctggacggtacagagcacgcaggagccctgtccgaaaa
cgttcaaaaagtcgcagccctttcagaaaagagaagagtcccattaggcaaccaattgac
aatctaacaccagaggagagagatgcccgcacagttttctgcatgcagcttgctgccaga
atcagagcccgagacctggaggatttcttctcagctgtcggaaaagtaagagatgtgaga
atgatctctgatagaaactccagaagatcaaagggcattgcatacattgagtttgtggag
gcttcgtctgtaccactggcgatcggactgactggccagcggcttttaggagtgcccatt
atcgtccaggcctctcaggcagagaaaaacagagctgctgctgctgctaataatctacag
aaggggagctcaggtccgatgcggctgtacgtcggctctctgcacttcaacattaccgaa
gaaatgcttcgagggatcttcgagcctttcggaaagattgaaggaatacagctcatgatg
gacagcgaaactggacggtctaaaggatacggcttcatatcgttttcagatgcagaatgt
gcaaaaaaggccttggagcaattgaatggctttgagctggccgggcgtccgatgaaggtg
ggacatgtcacagagcgctcagactcatcgacggccagctcgttcctggacaacgatgaa
ctagaaaggactggcatcgacctcggcaccacaggacgtctacagctcatggctcgtcta
gcagaaggaactggtctgaagatccctcctgcagctcagcaggctctacagatgactggc
tccataccctttggaaacatagctgctacaacagctgttccgactccagctccaagtcag
gcgttgaacctcccatcacagccgctggccacacattgccttcagctgtctaacctgttc
aacccacaatcggaaaatgaccccagctgggccatcgagatccaagatgatgtcattgag
gagtgcaacaaacacggaggaatcgttcacatttatgtcgataagaactctgctcaaggt
aacgtgtatgtgaagtgcccctcaataccagcagcgatggcaactgtaaatgcacttcat
ggacgctggtttgcaggcaaaatgataacagccgcctacgttcccttaccgacctaccac
aaccttttccccgattcagtgacggcgaagcagcttctaatgcctgcgcgtcgatag
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