Scomber japonicus (chub mackerel): 128357244
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Entry
128357244 CDS
T09718
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128357244 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128357244 (scn8aa)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128357244 (scn8aa)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
HpsJ
FraC
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
128357244
NCBI-ProteinID:
XP_053173509
LinkDB
All DBs
Position
4:16693733..16730726
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AA seq
1966 aa
AA seq
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MAAPLIPPGPDSFKKFTLESLAELELRITEEKNKKPPKQDSSYRDDDDENKPKPNSDLEA
GKSLPYIYGDPPSGMVAVPLEDLDPYYLNSQKTFIVLNKGKTIFRFSATPALYFISPFNL
VRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICAR
GFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVFWPINTTESYLSNGSKGF
DWDEYIMNDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAAQKEEEFKAMLEQLKKQQEDAQTAAMATSAGTVSEDAVEDDGGGHLSCSSSEMSK
LSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMN
QSLLSIPGSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPYR
RNSYSGFHGKRNSTVDCNGVVSLIGPGLGGRLLPEVKIDKAATDDSPTTEVEVKKKLSGS
LMVSVDQLNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFANTFLIWECSPKW
LKIKEIMNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGE
MLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLAATDDDGEPNNLQISVKRIKIGIAWFKAKMRIVVASLLKKPPMEDEQKPLDDMY
DKKLNCIANHTGVDINRDLDYVKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPI
AVGESDFENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVVEEVVVETVEEYMEPD
ACWTDACVAKYKCCDVSITMGWGKSWWFLRKTCFLIVEHNWFETLIIFMILLSSGALAFE
DVYIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVS
LVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKYYYCFNETSEEYFSVDVVNNKTQCEALMHQNFTEVRWKNVKINFDN
VGAGYLALLQVATFKGWMDIMYAAVDSREVEDQPNYEVNIYMYIYFVVFIIFGSFFTLNL
FIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDF
VQQQVFDISIMILICLNMVTMMVETDDQSDETEFVLYWVNFIFIVVFTTEFLLKLFALRH
YYFTNGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIR
TLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIIL
FMITTSAGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVV
NMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHP
LRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANP
SKVSYEPITTTLRRKQEDVSARTIQNAYRSHLIRRGIIFKRHPFTNNKLENGGTNQEKKE
STPSTASLPSYDSVTKPDKEKQDENKEEWARKEKDKNQKDEWESKC
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttataccgccaggacctgatagcttcaagaagttcactttggaatct
ttggcggagcttgagctgcgcatcacagaggagaagaacaagaagccacccaagcaggat
agcagctaccgcgatgatgatgacgagaacaaacccaagcccaacagcgacctggaggct
gggaagagtctgccctacatatacggggaccccccttctggaatggtggcggtaccattg
gaggacctggacccatactacctgaattctcagaaaacatttatagtgctgaataaaggg
aagacaatcttccgttttagtgccacacctgccttgtacttcataagtccttttaatctg
gttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatgtgt
actattttgaccaactgtatattcatgacctttagtgatcctcctgagtggtcaaagcaa
gtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatctgcgctcga
ggattctgtatagacgggtttacattccttagagatccatggaactggttggatttcatg
gtcatttccatggcatatataacagagtttgtggacctgggcaatgtatctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagaccatt
gtgggtgccctgatccagtctgtgaagaagctctcagatgtgatgatcctgaccgtcttc
tgcctgagtgtctttgccctcatcggtctccagctcttcatgggcaacctgcgccacaag
tgtgtgttctggccaatcaacaccaccgagagctacctgtccaatggcagcaagggcttt
gactgggatgagtacatcatgaacgacaccaatttctacttcctacctggccagctggat
gctcttctctgtgggaacagctcagactcaggccgctgcccggagggttacacatgcatg
aaagctgggaggaatccaaactacggctacaccagctttgacagcttcggctgggccttc
ctggctctcttccgactcatgacacaggacttctgggaaaatctctacatgctgacactg
agggcagcagggaagacctacatgatatttttcgtgttggtaatttttgtgggttcgttc
tacttggtgaatctgatcctggctgtggtagccatggcctatgaggagcagaaccaggcc
accatggaagaggctgcgcagaaggaggaggaatttaaggccatgctggagcagctcaag
aaacagcaggaagacgctcagactgctgccatggcaacctctgcaggcacagtgtcagag
gatgcagtagaggacgatggaggggggcacctgtcatgcagttcctctgagatgtcgaag
ctcagctccaagagtgccaaagagcggcgaaaccgtaagaagaagtggcggcagaaagag
caggaaaaggaaaaaggagacagtgagaagtttgtcaagtcagagtcggatgacggcagc
aagaggagccgcttccgtttccctgataaccgcctgggtcgaaagtcttccattatgaac
cagtcccttctcagtatacccggctcgcctttcctgtcccgccacaacagcaagagcagc
atctttagtttcaaaggccgcggtaaggatgtgggctcagagaacgaatttgcagatgat
gagcacagcacggtggaggagtgtgaggagcgtcggggctccctgttcagcccgtaccgg
cggaacagctatagcggcttccatgggaagaggaacagcacggtggattgcaacggcgtg
gtgtcactcattggccctggtcttggtggacgccttctgcctgaggtgaaaatagataag
gcagctactgacgacagtccaactactgaggttgaggtgaagaagaagctgtcgggctcc
ctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaacagt
gtcatgagcgtcattaccaacacactagtggaggaactggaggagtctcagcgaaagtgt
cccccatgctggtataagtttgctaacacattcctgatctgggagtgctcccccaagtgg
ttgaagattaaggagattatgaacctgatagtcatggaccccttcgtggacttagccatc
accatctgtatcgttctcaacaccctcttcatggccatggagcactaccccatgacccct
gactttgaggatatgctgtctgtaggcaatctggtcttcaccggtatttttgcaggggag
atgcttttcaaactggtggctatggatccctactactacttccaggaggcctggaactgt
ttcgatggtttcattgtgacactgagtttagtggagctggctttggctgacgtcgagggc
ctgtctgtgctgcggtcattccgattgctgagagtgtttaaactggccaagtcatggccc
accctcaacatgctgatcaagatcataggtaactcagtgggagccttggggaacttgact
ctggtgctggccatcatcgtcttcatctttgctgtggtaggcatgcagttgtttggaaag
agctacaaagactgtgtgtgtaagatagctgctgactgtgagctgccccgctggcacatg
aacgacttcttccattccttcctgatcgtcttccgggtgctgtgtggtgagtggatcgag
accatgtgggactgcatggaagtggcgggccaaggcatgtgcctcatcgtcttcatgatg
gtcatggtgattggtaatctcgtggtgttgaacctgtttcttgccttgctactgagctca
ttcagcgctgacaacttggctgcaacagatgatgacggtgagcccaacaacctacagatt
tctgtcaagcgtataaagataggcattgcgtggtttaaagcgaagatgcggatagtggtg
gccagtctgctgaagaaaccaccaatggaggatgaacagaagcctttggatgacatgtat
gacaagaagctgaactgcattgctaaccacaccggagtggacatcaaccgtgacctggac
tatgtcaagaatggtaatggcaccaccagcggtattggcagcagtgtgggcaagtatatg
attgatgaggaccacatgtcgttcatccacaacccgaacctgactgtctgcgtgcccata
gctgtgggagagtctgactttgagaacctcaacacggaagacttcagcagcgagtctgaa
aatgagaacagcaaagagctggatgacaccagttcatcagaaggcagcaccatcgacatc
aagccagatgtggtggaggaggtggtggtggagacggtggaggaatacatggagccagac
gcgtgttggacagatgcttgtgtggccaagtacaagtgctgtgacgttagcatcacaatg
ggctgggggaagagctggtggttcttgagaaaaacctgctttctgattgtggagcacaac
tggtttgagaccctgatcatcttcatgatcctcctcagtagcggtgccctggcatttgag
gatgtgtacattgagcaaaggaagaccattcggatcattttggaatacgctgacagggtt
ttcacctacatcttcatcctggagatgttactgaaatgggtcgcctatggttttgtcaag
tacttcaccaatgcctggtgttggctggacttcttcattgtggatgtgtctatagtcagc
cttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggacacta
agggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtcaac
gccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttgg
ctgattttcagtataatgggggtcaacctgtttgcgggcaagtactactactgtttcaat
gagacatcagaggaatacttttccgttgatgtggtcaacaacaagacccagtgtgaggcc
ctcatgcaccaaaactttaccgaggtcaggtggaagaatgtcaagatcaactttgacaat
gtgggcgccggctacctggctttactacaagtggccacattcaaaggctggatggacatt
atgtatgcagctgtggattctagagaggtggaagaccagcccaactatgaagtcaacatc
tacatgtacatctacttcgttgttttcatcatattcggctccttcttcaccctgaacctc
tttattggtgtgatcattgacaacttcaaccagcagaagaaaaagtttggaggccaagat
atcttcatgacggaggaacagaagaagtactacaatgccatgaaaaagctggggtccaaa
aagccacaaaaacctattcctcgaccacagaacaagatccagggaatggtgtttgacttt
gtacaacagcaagtctttgatatctccatcatgattcttatctgcctcaacatggtcacc
atgatggtggaaacagacgatcagtctgatgaaacagaatttgtcctctactgggtcaac
tttatctttattgtagtcttcaccacggagttcttactgaagctttttgcccttcgccac
tattacttcaccaatggctggaatatctttgacgttgtggtggtcatcctttcaattgtc
ggtatgttcctggctgacattattgagaagtactttgtatcgccaactctgtttagggtg
atcaggttggctcgtattggccgtatcctccgtctgatcaaaggagctaagggtatccgg
actttactctttgctctgatgatgtcactgccagccctgttcaatattggtctactgctc
ttcctggtcatgttcatcttctcgatcttcggcatgtctaatttcggctacgtaaaacat
ggagcgggaattgacgacttgtacaacttcgagacctttggtaacagcatgatcatcctg
ttcatgatcaccacgtctgctggctgggatggcttgctgctgccgatcctcaactaccca
ccagactgtgatcccaatttggaaaacccaggcacctctgtaaagggcgactgtggtaac
ccgtcggtgggaatcttcttttttgtcatgtatatcatcatttcttttctgattgtggtc
aatatgtacattgccatcattctggagaacttcagtgtggccacagaggaaagtgctgat
ccactcagtgaggacgacttcgagaccttctatgagatctgggagaagtttgaccctaca
gcctctcaattcattacttttgccaagctgtctgactttgctgacgctttagagcaccca
cttcgtgtgccaaagcccaacactatagaactaattgccatggacatgcccatggtgagt
ggcgatcgcattcactgcctagacatcctgtttgccttcacaaagcgtgtgctgggtgac
agtggtgagttggacatgctgaggcagcagatggaggagcgtttcgtggcagcaaaccca
tccaaggtctcatatgaacccatcaccaccacgctacgccgcaaacaggaagatgtttcc
gccagaactatccagaacgcctaccgttctcacctcatcaggcgtggcatcatcttcaag
cgtcaccctttcaccaacaataagcttgagaatggagggaccaaccaagagaagaaggag
agcacgccatccactgcctctctcccctcttatgacagcgtgaccaaaccagacaaggag
aagcaagatgagaacaaagaggagtgggccaggaaagagaaggacaaaaaccaaaaagat
gagtgggaatccaagtgttag
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