Scomber japonicus (chub mackerel): 128357259
Help
Entry
128357259 CDS
T09718
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128357259 (nsun5)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
128357259 (nsun5)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Other ribosome biogenesis factors
128357259 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
CCDC106
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
128357259
NCBI-ProteinID:
XP_053173545
LinkDB
All DBs
Position
4:complement(12848732..12854509)
Genome browser
AA seq
506 aa
AA seq
DB search
MALYMKAAEILEKAEKKQGALKTLVYDSKFGNIKQLFALVCETQKFSAVLQEIIESTKLL
KNTKLKMPLAKVLAYDLLMGQGLKCGGSWKAVMMKHRSRMQAALARMKVKQKVSRNDGLL
QADVLQSPGDQLPRYVRVNTVKTTVEDAVDYLKRDGFSYLGQACRMDDLTLQRKHFVMDL
HLPEVLVFSPKTDFHDHFLYKAGHIILQDKASCLPAYLLNPPPGCHVIDACAAPGNKTSH
LAAKMKNKGKLFAFDLDAKRLSTMSTLLLRAGVTCQQLANQDFLKVDPDSPQYKDVEYIL
LDPSCSGSGMVCLRDNTSSADQQANQARLVSLAAFQLRCLNHALKFPSLKRLVYSTCSIH
SQENEDVVSACLQQNPGFRLVSLLPQWPERGLEPLTQCLRASTAKTRTHGFFVALLEKHT
DTGNLKQEPAIQISESQVTPRSPLACEKRPAASSEESEASETEDKPTPDAGQTDSTPEKK
RKRTRKRKKKKKAAAATTTTTTTTTE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtacatgaaggcagctgagatcctggagaaagcggagaagaagcagggcgct
ctgaagactctggtgtacgacagtaagtttgggaacataaagcagctgtttgctttagtt
tgtgagacgcagaagttttccgccgtgctgcaggagatcatcgagtccaccaagctgctc
aaaaacaccaagctgaagatgcccctggccaaggtgctggcctacgacctgctgatgggt
cagggtctgaagtgcggcggctcctggaaggcagtcatgatgaagcaccgctccaggatg
caggctgcacttgctcgcatgaaagtgaagcagaaggtcagcaggaacgatggtctgctc
caggccgacgtcctgcagtcccctggggaccagctgcccaggtatgtgcgtgtcaacacc
gtgaagaccaccgtggaggatgctgtggactacctgaagagggatggcttctcctacctg
ggacaggcctgcagaatggatgacttgaccctgcagaggaaacactttgtgatggaccta
cacctgcccgaggtgctggtcttctctcctaaaacagacttccatgaccacttcctgtac
aaagccggtcacatcattctgcaggacaaagccagctgcctccccgcctatctcctcaac
cccccacccggctgccatgtcatcgacgcctgtgctgcccccggcaacaaaaccagccac
cttgcagccaaaatgaagaacaaaggcaagctgtttgcctttgatttggatgccaagcga
ctgagcaccatgtcaaccctcctgctcagagcaggagtcacctgtcagcagctggccaac
caggacttcctgaaggtggatcctgacagcccgcagtataaagatgttgagtacatcttg
ctggatccctcctgcagtggatcaggtatggtgtgtctgcgggacaacacctcctctgca
gaccagcaggccaatcaggctcgtttggtctccttagctgccttccagctgcgttgcctg
aatcacgccctcaagttccccagcctgaagcgcctggtctactccacctgctccatccac
agccaggagaacgaggatgttgtcagtgcttgtcttcagcagaacccgggcttcagactg
gtttctctgctgcctcagtggcctgagcgaggtctggagccgctcactcagtgtctgcgt
gccagcaccgccaagacccgcacacatggcttctttgtggctctgctggagaaacacact
gacactgggaacctgaagcaggaaccggccatccagataagtgagtcacaggtgacacca
cgcagtccactcgcctgtgagaagagacctgcagcttcttcagaagagtctgaagcttca
gagacggaggacaaacccacgcctgatgcaggacagactgacagtacaccagagaagaag
aggaagaggacgagaaagaggaagaagaagaagaaggcggcagcagcaacaacaacaaca
acaacaacaacaacagagtga
DBGET
integrated database retrieval system
