Scomber japonicus (chub mackerel): 128357264
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Entry
128357264 CDS
T09718
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128357264 (apex2)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128357264 (apex2)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128357264 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Methyltransf_7
Amastin
Motif
Other DBs
NCBI-GeneID:
128357264
NCBI-ProteinID:
XP_053173549
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Position
4:complement(26344228..26347588)
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AA seq
583 aa
AA seq
DB search
MKVVTWNINGIRTFRDGIKKALDSLDADVICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHAGAVGCYGDHTEFSSEELQQLDNEGRAV
ITQHKIMCQNKMQTVTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEEILKDGSHVIVL
GDVNTSHRPIDHCDPSDIDDFEENPGRKWLNGFLHGCRQEKERNEEEPDEAPEITDTAHS
GKFMDTFRYFHPSRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPEVE
GSDHCPVWGQLSCSLQPSSKPPPLCTRYLPEFAGKQQKLSRFLVTVDQKSVQSEQKAALP
GSQEEGEKRENIHPSGVGNISGKKRILTADSVAPKGKKAKTVKTSSKPQGNLLSFFKPKL
THVAQPTETSVKQCERTLDLDEVTSFNNSHKGPTTKEDVLSVAGKITEDTELACDGSSRL
CTSSTTEDSDKQVKTEAEHLTSQTSVGHCAAKKGASLVFWKSVLHGPPPAPSCKVHREPC
VLRTVKKEGPNMGKQFFVCCRPQGHSSNPEARCNFFAWVDKGK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggtcacctggaatataaatggcatcaggacattcagagatggtatcaaaaag
gctcttgattcactggatgcagatgttatatgcgtccaggagactaaagtcacgagagac
ttgcttgatgaaagaactgcaattgttgacggatacaattcctatttcagcttcagcaga
ggacgcagcggctactcaggggttgccacttactgtaaggacagtgccactccatttgct
gcagaggagggtctcacaggtctactgaccaaccatgctggggctgttggatgctacggt
gatcacactgagttttcaagcgaggagctgcagcaattagacaatgaaggacgagctgtt
ataacacagcacaaaatcatgtgtcagaacaaaatgcaaaccgttactgtaatcaacgta
tactgtccacgagcggaccctgaaaagccagagcgaaagcagtttaaactgcagttctac
aagctgcttcagtgtcgagctgaagaaattctgaaagatgggagccatgtgattgtttta
ggagatgtaaatacatctcaccgaccaatagaccactgtgaccccagtgacattgacgat
tttgaggagaaccctggccggaaatggttgaatggctttctgcatggttgcagacaagaa
aaagaaaggaatgaggaggaaccagatgaagcacctgaaataactgatactgcccacagt
ggaaaatttatggacacttttcgctatttccacccaagtcgcaccaatgccttcacatgc
tggtccactctcactggagctcggcagaccaattatggcacacgcattgattacatattt
gctgactgtcagctagccaaggagcagtttgtggcagcggacatcatgccagaggtggaa
gggtcagaccattgccctgtgtgggggcaactgagctgctctctccagccaagctccaag
cctcctcccctgtgcacacgctacctgccagagtttgcaggcaagcagcagaaactctcc
cgattcctagttacggtggaccagaaatcagttcagtcagagcagaaggctgcattacct
ggatctcaagaagagggggaaaaaagggagaatatacacccctctggagttggaaacatc
tccggtaaaaagcgaatattgacagcagactctgttgccccaaaaggtaaaaaggccaag
acagtaaagacttcttcgaaaccacagggcaacctgctttcttttttcaaaccaaagctc
acacatgtggctcaacccactgaaacgtctgtcaagcagtgtgaaagaacacttgaccta
gatgaagtaacctcatttaacaattcccataaagggcccacgactaaagaagacgtattg
tcagtcgctggaaagataactgaagatactgagcttgcctgtgatggttcgtcacggctg
tgcaccagcagcaccacagaggacagtgacaaacaggtgaagacagaagctgaacattta
acctctcagacctctgtgggacattgtgctgcaaagaaaggggcatcactagtgttttgg
aagtcagtgcttcatggaccacccccagcaccttcctgtaaggtgcacagggaaccctgt
gtgctccgtactgtgaaaaaggaaggtccaaacatgggcaagcagttctttgtgtgttgc
cgccctcagggacattcctccaaccctgaggctcgctgtaatttctttgcatgggtagac
aaggggaaatga
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