Scomber japonicus (chub mackerel): 128357302
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Entry
128357302 CDS
T09718
Symbol
hoxc13a
Name
(RefSeq) homeobox protein Hox-C13a
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357302 (hoxc13a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128357302 (hoxc13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
128357302
NCBI-ProteinID:
XP_053173597
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All DBs
Position
4:18003778..18007091
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AA seq
306 aa
AA seq
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MTTSLVLHPRWADTLMYVYEKSPNENNQNKSQTMEGLSGNCPATHCRDLMSHPALGRHSG
TIATHQGSVYSDISSPDTGRQCPAPQTSSSASLSYGYPFGNPYYGCRLSHSHNVNLQQKP
CSYHPAEKYAEPSTALPTEELSTRAKEFAFYPSFASSYQAVPGYLDVSVVPSISAHPEPR
HDALIPMEGYQHWALSNGWDGQVYCSKEQTQSTHLWKSPFPDVVPLQPEVSSYRRGRKKR
VPYTKIQLKELEKEYAASKFITKDKRRRISAATNLSERQVTIWFQNRRVKEKKFVSKSKN
NHMHTT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcgctggttctgcatccacgctgggcggacaccttgatgtacgtttatgaa
aaaagcccgaatgaaaacaaccagaataaaagccaaacaatggagggactgagcggtaat
tgccctgcgacccactgcagggacctgatgtcgcaccccgcgctgggacgacattctggc
accatagcgacccaccagggctccgtctactcggatatttcttctccagacaccggccgt
cagtgtcccgctccccaaacatcatcgagtgcatctttgagctacggttatccatttgga
aacccatattacggctgtagattatctcattcgcacaacgtgaacttgcagcagaagccc
tgctcgtaccaccccgcagagaaatatgccgagccaagcacagcgctgcccacggaagaa
ctgtctaccagggcgaaagagtttgccttctacccgagtttcgccagctcatatcaggct
gttcccggatatctcgatgtgtcggtggtgcccagtatcagtgcccatcctgaaccgcgg
cacgacgccttgatccccatggagggctaccagcattgggctctctcgaatggctgggat
gggcaggtgtactgctccaaagagcaaacgcagtcaactcatctttggaaatcacctttt
ccagatgttgtgccactgcagcctgaggtcagcagttaccgtcgtgggcgtaaaaagcgt
gtcccttacacgaagatccagctgaaggagctggagaaagagtatgcagccagcaagttc
atcaccaaagacaagagaaggcgcatctcggccgccaccaacctctcagagcgtcaagtc
accatctggttccaaaaccggcgggtcaaggagaagaaatttgtcagtaaatccaagaac
aatcacatgcacaccacttga
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