Scomber japonicus (chub mackerel): 128357327
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Entry
128357327 CDS
T09718
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128357327 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128357327 (taf11)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128357327 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
128357327
NCBI-ProteinID:
XP_053173629
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All DBs
Position
4:complement(27589736..27592755)
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AA seq
205 aa
AA seq
DB search
MADPARIKVEDTPERASSDKEEHLKLEEAEDIPVTPKPADEPKESTSQDQPKQEIKSDAA
AGEDEEEGTSGQPASKRLKVEPEKKKEKRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRR
SAFPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDTPPLQPKH
MREAVRRLKSRDQIPNTKHKHILFH
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccctgcacggatcaaagttgaggacacacctgagagagcatcttctgataaa
gaggagcacctgaaattagaggaagctgaagatatacccgtcacaccgaaacctgcagac
gagcccaaagagtcgacctctcaagatcagcccaaacaggagatcaaatctgatgctgca
gccggagaagatgaggaagaaggaacttcaggccaacctgcttccaaaagactgaaggtg
gaaccagagaagaaaaaggagaagcgccaaaaggttgatgaggatgaaatacaaaagatg
caggttttagtgtcctccttctctgaagagcagctgaatcgatatgaaatgtatagacgt
tctgccttcccaaaggctgctattaagaggctgatccagtccataacaggatcatcagtg
tcccaaaatgtggtgatcgccatgtctggtatttccaaggtttttgctggagaaatagtt
gaggaagcattggatgtttgtgagaagtggggagatacaccaccacttcagcccaagcat
atgagggaagcagtgaggaggctgaaaagcagagatcagattcccaacaccaagcacaag
cacattctctttcactga
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