Scomber japonicus (chub mackerel): 128357374
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Entry
128357374 CDS
T09718
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1
KO
K20102
YTH domain-containing family protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128357374 (ythdf1)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128357374 (ythdf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
128357374
NCBI-ProteinID:
XP_053173687
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All DBs
Position
4:complement(25882534..25892267)
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AA seq
633 aa
AA seq
DB search
MMSATSIDPQTSKGQDASKAFPVSVQNGSLHQKDTVHDNDFEPYLTGQSNQNNSYQSMTD
PYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLSS
SIYPHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFHSD
TLSKAPGMNSLEQGMLGLKIGGDVTGSGSGVKNTGSVIGGGGGVAAAVATGNGGTPMGMP
PPKPTSWAAIASKPAKLQQQKTKNKPGTPIAGGPLPPPPIKHNMDIDTWDNKGVATKMAP
PLPPHHHHHHHQHQHQHHHHQQHHQQHQPQQLHSHPPSLLPPLQQSLQSAQSLVQQMTMQ
GPPPPPPQSYQNHNSAPTPQTRWIAPRSRNLCYGGGSLDSSGSSNGGGVGNGGGGVGCVP
PELGSESHPVLEKLRAAHSYNPKEFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHG
NKRLDSAFRAMNSKGPVYLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVN
WLFVKDVPNSQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIAQYKHTTSIFDDFS
HYEKKQEEEEVVKKSYEPASIPSRSRIDQDRQK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgccacgagcattgaccctcagacatcgaaaggacaagatgcaagcaaagcc
tttccagtttcagtgcagaatggctccctccaccagaaggacacagtccatgacaacgac
ttcgagccctatctcaccggccagtccaatcagaataacagctatcaatccatgacagac
ccttacctgtccagctactatgccccctccattgggtttccttaccccctcagtgaggct
ccgtggtctacaggaggcgatccaccaattccctacctgacaccctatgcccccctcagc
aatggagaccatcacttcatgcacgacacagtatttgggcagccgggggggctcagcagc
agcatttacccacacaggtttaacttcttcccagagaacccagctttctccgcatggggg
accagtggctcccagggccagcagactcaaagctcagcgtacgggggaagttacagctac
ccacccagctctctaggaggcacattagtccctgatggccagacgggtttccatagcgac
accctgagcaaggctccaggtatgaacagcctagagcagggcatgctgggcctaaaaata
ggcggggacgtgacaggaagcggctcgggtgtgaagaatacaggctctgtgatcggtggc
ggcggtggtgtagctgcagctgtcgccacgggcaacggcggcacaccaatgggaatgccc
cctccgaagcctacatcgtgggccgctatagctagtaaacctgccaagctgcagcaacaa
aagaccaagaacaagccaggaacgcccatagctggaggacctctgccccccccgcccatt
aaacacaacatggacatcgatacttgggataataaaggtgtcgctaccaagatggcgcct
cctttgccgccccaccaccatcaccaccaccaccaacaccaacaccaacaccaccaccac
caacagcatcaccaacagcaccagccgcagcagcttcactcccaccctcccagcctctta
ccccccctccaacagtccctacagtctgcccagtccctcgtgcagcagatgaccatgcag
ggccctccgcctcctcctccgcagtcttaccagaaccacaactccgctccaacacctcag
acccgctggatagccccacgcagtcgcaacctgtgctacggcggcgggagcttggacagc
agtggctcctctaacggcggcggtgtcggtaacggaggtggaggcgttgggtgcgtgcct
ccagagctggggtccgagtcccacccggtcctggagaagctgcgagctgcccacagttac
aacccgaaggagttcgactggaacctgaaaaacggccgagtgttcatcatcaagagctac
tccgaggacgacatccaccgctccatcaagtactccatctggtgcagcacggagcacggc
aacaaacgtttggactcggccttcagagcgatgaactctaaaggtcccgtctacttgttg
ttcagcgtcaacggcagcggccatttctgcggcgtggcggagatgcgctcgcctgtggac
tacggcaccagcgcgggtgtttgggcgcaggacaagtggaagggcaagtttgacgtgaac
tggttgtttgttaaggacgtgcctaatagccagctgcgccacatccgcctggagaacaat
gacaacaagccagtcaccaactctcgtgacactcaagaggttcctctggagaaggcgaag
caggtgctcaagattatcgcccagtacaaacacaccacctccatctttgatgacttttcc
cactatgagaagaagcaggaggaggaggaggtggtgaaaaagagctacgagcctgcctca
ataccgagccgatcccgaatcgatcaggatcgtcagaagtaa
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