Scomber japonicus (chub mackerel): 128357390
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Entry
128357390 CDS
T09718
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128357390
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128357390
04081 Hormone signaling
128357390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128357390
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
128357390
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
V1R
Motif
Other DBs
NCBI-GeneID:
128357390
NCBI-ProteinID:
XP_053173707
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Position
4:complement(25463066..25465256)
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AA seq
391 aa
AA seq
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MDNNTTIFQDVTQVLNLTQMPLKPLEEQFITIFLTMLICGVGIAGNIMVVLVVLRTKHMV
TPTNCYLVSLAVADLIVLLAAGLPNISDVVAFWIYGYTGCLCITYLQYLGINVSSCSITA
FTIERYIAICHSIKAQFICTVSRAKRIIAGVWIFTSLYCIMWFFLVDTDETVYTNGVVVT
CGYRVSRSLYMPIYFLDFTLFYVIPLVVATVLYGLIARILFMSPLPSHLNDRDGGGSVHQ
GHSNSTNKANKSAVSARKQITKMLAVVVILFALLWMPYRTLVVVNSVIDPPYHNTWFLLF
CRMCIYTNSAINPIIYNLMSQKFRVAFKKLCKCSCRQKEKAAEYNVPMYYSVTKDSSHES
NELVTEHEEVSSHNNKRIHLTDDDTSTFSIS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaacacgaccatctttcaggatgtcactcaggtgttaaatctgacacagatg
cctctgaagcctcttgaagaacagttcattacgatatttttgacaatgctcatctgtgga
gttgggattgctgggaatatcatggtggtgttggttgtcctgcgcactaaacacatggtg
accccaactaactgctacctcgtaagcctagcggtcgcagacctcattgtgctcctggct
gcggggcttcctaatatctctgacgttgtggccttctggatatacggctacacaggctgc
ttgtgtataacttaccttcagtacctgggcatcaatgtgtcgtcctgctccatcacagca
ttcaccatcgaacgatacattgctatttgtcactccataaaggcacagttcatctgcact
gtttcccgcgccaagaggatcatagctggagtctggatcttcacttcactctactgcatc
atgtggttctttttagtggacacagatgagaccgtctacaccaacggagtggtggttacc
tgtggctaccgtgtctccaggagcctctacatgccaatctacttcctggacttcacgttg
ttctatgtgatcccgctcgttgtggcaactgtgctgtacggactcatcgccagaattttg
ttcatgagcccgctgccctcgcatctcaacgacagagatggaggagggtcggttcaccaa
ggtcactccaacagcactaacaaggccaacaagagtgcagtctctgcaaggaagcagata
actaagatgctggctgtagtggtcatcctcttcgccttgctgtggatgccttaccgaaca
ctggtggtggtcaactccgtcatcgacccgccttaccacaacacgtggttcctgctcttc
tgccgcatgtgcatttacaccaacagtgccatcaaccccattatttacaacctcatgtct
cagaagtttcgtgtcgcattcaaaaagctctgcaagtgcagctgccgacaaaaggagaag
gcggccgagtacaacgtgccgatgtattacagcgtgacgaaggattcgtcccatgagagc
aacgagctagtcacggagcacgaggaagtgagcagccacaacaacaagaggatacatttg
acggatgacgatacgagcacgttcagcatttcttaa
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