Scomber japonicus (chub mackerel): 128357434
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Entry
128357434 CDS
T09718
Symbol
emc1
Name
(RefSeq) ER membrane protein complex subunit 1
KO
K23562
ER membrane protein complex subunit 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128357434 (emc1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
128357434 (emc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
PQQ
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-GeneID:
128357434
NCBI-ProteinID:
XP_053173760
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All DBs
Position
4:13245018..13255527
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AA seq
962 aa
AA seq
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MAKLIWFFMKCIVLWSTVEAVFEDQVGKFDWRQQYVGKVRFAHFDTHLQSSKKVIVATEN
NVFAAVNTRTGELLWRHVDKTGPEGNIDTLLHHGQDAVLSVGNGRLLRSWDVSVGGLNWE
VVLDSGSFQAACFVGQQDTVKHVAVLKKSVISLHYLSNGHQKWIENLPESETVDYQTVYS
DGNGEVHVLGVVPHSHIAVVVYSVDDGEIIKQVSVEAPWLSNIQASCAVVGQGMLTCVDS
ATVSLYMLDLHAQSQMTQIPLQSLGLEVIPGFHPVLVATQPNPARQPLSEFVLQLGPENH
LLLQLNNGQIVTLRDFKPAMLTSFATTGEKTVVAVMSPKNKTACSLNLFSAESGRRLLDT
TLIFNMDPNGGKPEKLYVQSFLKKDDSVGYRVIVQTEDHTITFIQQPGRVMWTREEALSD
VVTMEMVDLPLTGTQAELEGEFGKKADGLMSMVLKRLSSQLILLQAWISHLWKLFYDARK
PRSQVKNDVTIENLSRDEFNLQKMMVMVTASGKLFGIDSKTGSILWRHYLDNIPSNAAFK
LMVQRTTAHFPHPPQCTLLIKDKETGLAMLHVFNPIFGKKSHVTPPALPQPILQSLMLPL
MDQDYAKVLLLIDDQYKVSAFPSTKNVLQQLQEMASSIFFYLVDSSQGRLSGYRLRTDLS
TELIWEVVIPTEVQKIVSVKGKRPNEHVHSQGRVMGDRSVLYKYLNPNLLAVVTESTDLH
QERSFVGILLIDGVTGRIIHEAVQRKTKGPVHVVHSENWVVYEYWSTKSRRNEFSVIELY
EGMELYNSTVFSSLDRPHVPQVLQQSYIFPSAISTMEATLTEKGITSRHLLIGLPSGGIL
SLPKMFLDPRRPEIVSEQSREENLIPYAPELLIRTEWFINYNQTVSRVRGIYTAPSGLES
TCLVVAYGLDIYQTRVYPSKQFDVLKDDYDYMLISSVLFALFFATMISKRLAEVKLLNRA
WR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagctaatttggttcttcatgaaatgcatagttttatggagtactgtcgaggct
gtgtttgaggatcaagtcggaaaatttgactggaggcaacaatatgtaggcaaggttcgc
tttgcccactttgacacacatttgcaatcatccaaaaaggtgattgtggcaactgagaac
aatgtttttgcagcagttaataccaggactggagaacttttgtggcgacatgtggataag
actggaccagagggaaacattgacactcttctgcatcatggacaagatgcggtgctgtca
gttggtaacggccgccttctgcgctcctgggatgtcagtgttggtggtttgaactgggag
gttgtgcttgactctggcagtttccaggcagcatgtttcgttggacaacaagacacagtg
aaacacgtagctgttttgaagaaaagtgtcatttctctccattatctttccaatggtcac
caaaaatggatagagaatcttccagaaagtgaaactgtggattaccagactgtgtattct
gatggaaatggtgaagttcatgtactgggagtcgttcctcattcccacattgcagttgtt
gtttacagtgtggatgatggagagataattaagcaggtgtcagttgaagctccgtggctg
tccaacatacaggccagctgtgcagtggttggccaggggatgttgacatgtgtggactct
gcaactgtatccctctacatgcttgacttgcacgcacagtcacagatgacccaaatcccc
ctgcagtcactgggacttgaagtcatacccggcttccatcctgtgctggttgccacccag
cccaacccagcccggcagccgctgtcagagtttgttcttcagctcgggcctgaaaaccac
ctgctgctgcagctcaacaatggtcagatagtcacactgagggatttcaagcctgccatg
ctgacttcatttgcaaccactggagagaagactgttgttgctgtcatgtcacccaagaat
aaaacggcttgcagtcttaacctcttcagtgcagaatctgggcgcagacttctagacaca
accctgatttttaatatggatccaaatggtgggaaaccagagaagctgtatgtgcaatca
ttcctgaagaaagacgactctgttggctaccgggtcattgtgcagacagaagaccacaca
atcactttcatacaacagccagggcgtgtaatgtggacaagagaggaggccctgtcagat
gtggtgacaatggaaatggtggatctgcccctcacaggaacgcaggcagagctggaggga
gagtttggcaaaaaggccgacggcctgatgtccatggtgttgaagaggctctcctctcag
ctcatcttgctgcaggcatggatctcccacctctggaagctgttctacgatgcacggaaa
cctcgcagccaagttaaaaacgacgtgaccattgagaacctgtccagagacgagttcaat
ctgcagaagatgatggttatggttactgcgtctggcaagctctttgggattgacagcaag
accggcagtattttatggaggcactacctggacaacatcccatctaatgcagcattcaaa
ctaatggtgcaacggacgactgcacacttccctcatcccccacagtgcacactgctcatc
aaagacaaggaaacagggctcgccatgcttcatgtgtttaaccccatctttggaaagaaa
agtcacgtcaccccacccgctctgcctcagccaatactgcagtcactcatgctaccgctc
atggaccaggattacgctaaagtcttacttctcattgatgaccaatacaaggtgtctgcc
ttcccttctacaaagaatgtattacagcagctccaggagatggcttcatccatattcttt
taccttgttgactccagtcagggaagactgtctggctacaggctacgaacggacttgtcg
accgagctgatctgggaggtagtcatcccaacggaggtccagaagattgtctcggtcaaa
gggaaaaggcccaacgaacatgtgcactctcagggcagagtaatgggagaccgtagtgtc
ctttataagtacttgaaccccaatcttctggcagtggtgactgagagcacagacttgcat
caggagcgcagctttgtcgggatcctgctgattgatggtgtgactggtcgcattatccac
gaggctgttcagagaaagaccaaaggaccggtgcatgttgtgcactctgaaaactgggtg
gtgtacgaatactggagcaccaagtctcgcaggaacgagttctctgtgattgaactgtat
gaagggatggagctctacaacagcactgtgttcagctcgctagatcggccacatgttccc
caggtgttgcagcagtcttacattttcccctccgccatttctaccatggaggccaccctg
actgagaagggcatcaccagccgccatctgctcattggcttgccatcaggaggaattttg
tcattgcccaaaatgttccttgatcctcggaggcctgaaatagtatctgagcaaagccgg
gaggagaacctgataccatacgcaccggagttgctgatccgaacagagtggttcatcaac
tacaatcaaactgtatcaagagtgcgaggaatttacactgccccctctggcctggagtca
acctgcctggtggtggcatatggtcttgacatctaccagacgcgtgtctatccctcgaag
cagtttgacgttctgaaagatgattacgactacatgctgatcagcagcgtcctcttcgct
ctgttcttcgccaccatgatcagcaaacgcctggcagaagtcaaactgctcaaccgggcc
tggcggtaa
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