Scomber japonicus (chub mackerel): 128357480
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Entry
128357480 CDS
T09718
Symbol
hoxc4a
Name
(RefSeq) homeobox protein Hox-C4a isoform X1
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357480 (hoxc4a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
128357480 (hoxc4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
SR-25
DUF755
Motif
Other DBs
NCBI-GeneID:
128357480
NCBI-ProteinID:
XP_053173810
LinkDB
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Position
4:18085428..18096116
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AA seq
266 aa
AA seq
DB search
MIMSSYLMESNYIDPKFPPCEEYSQNNYIPEHSPEYYSRARESGYQHHHQELYPPRASYQ
ERQYNCASIPEPDTPRGHGIPHSAHLLIGKGQPASCETPQLSMSPATPPAAASACNQATP
EHPNSTASSKQPVVYPWMKKIHVSTVNQGYNGTEPKRSRTAYTRQQVLELEKEFHYNRYL
TRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSSSSSSSSGSNTSSAAGA
VAAASATNTGASDELTGAQHGEDITR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagctcgtatttgatggagtctaactacattgatccgaaatttcctccatgc
gaggaatattcgcaaaataactacatccctgaacatagtccagaatattacagccgcgca
agggagtctggctaccagcatcaccatcaggagttatatcctccgcgggcgagctaccaa
gagcgccagtataactgtgcaagcatccctgaacctgacacgccaaggggacatggaata
ccccattctgcgcacctgctgatagggaaggggcaacctgcttcatgtgaaaccccacag
ttgtccatgtcccccgccaccccaccggccgcagcctccgcctgcaaccaagctaccccg
gagcatccaaacagcacagcctcctccaagcagcccgtggtgtacccgtggatgaagaaa
attcacgtcagcactgtgaaccagggttacaatgggacggagcccaagcggtctaggaca
gcatacacccggcagcaagtcttagaattggagaaggaattccactataaccggtattta
actcggcggaggcgcatcgagattgcccataccctggttctctctgagcgacagattaaa
atctggtttcaaaaccgcaggatgaaatggaaaaaggatcacaggctcccgaacaccaaa
gtgagatcctcctcttcctcctcctcctccgggtccaacacaagctcagcagccggcgct
gttgccgctgcctcggccactaacactggtgcctccgacgaactcaccggagcgcaacat
ggagaggatattaccaggtaa
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