Scomber japonicus (chub mackerel): 128357557
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Entry
128357557 CDS
T09718
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
128357557
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128357557
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
128357557
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
FORS blood group (Forssman antigen)
128357557
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
128357557
NCBI-ProteinID:
XP_053173931
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Position
1:complement(18191910..18198786)
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AA seq
390 aa
AA seq
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MKIAQKITCSSLPSIEDIYIRRCRSCAACIMGDPTHLAHGLFAPLPSGKRLQSMKARTTR
LRRSFYPEASSLCLHKKSRLILQVRSKSGFCEIKQSIKLTFRLKYAQPSTQKGRTDVNSV
TNWNAPLVWEETFDPVVIDAIYKKMDPRVAVVVFAVGKYTRFLKGFLESGENYFLVGFRV
TYYIFTDNEDNVPKIELGEGRKISVITVPSAKRWQDVVLGRMKWTTITIDKQIRNEADYL
FMMDIDSVFHNRFGAESLSQLSAVLHRGYYKATHRDKFPYERRPASKAYIPAGEGDYYYT
AAVWGGYLEEMYKLVKYCYVQSEEDAKNKIEAVWQEESHLNKYLLYNKPTKVLSPEYLWS
DYDQIPSDIKVVRISQLVKNYAEVRPNGGQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcccagaagatcacctgcagcagtcttccatccattgaggacatctacatc
aggaggtgcaggagctgtgcggcctgcatcatgggggacccaacccacctggcccatgga
ctgtttgcacctctcccctcgggtaagaggctgcagagcatgaaggccagaactactagg
ctcaggcgcagcttctaccctgaggctagctctctatgtctacacaagaagtcccgtctc
atccttcaggtaagatccaaatcaggtttctgtgagattaaacagagcatcaaactaacc
tttcgactgaaatatgctcagccaagcacacagaaaggacgtactgatgtgaactcagtg
acaaactggaatgctcctctggtctgggaggaaacctttgatccagtggtcattgatgca
atctataagaaaatggacccaagagttgctgtggtggtgtttgcagttggcaaatacacc
cgtttccttaagggtttcctggagtcaggtgaaaattactttcttgttggcttcagggtc
acttactacatattcacagacaacgaagacaatgttcccaaaatcgaactgggtgagggc
cgcaagatctcagtcatcactgtccctagtgccaaacgttggcaggatgtagtacttggt
aggatgaaatggactaccatcaccattgacaaacagatccgtaatgaggcagattatctt
tttatgatggacattgatagtgtcttccacaatcgctttggggctgagtcgctcagccag
ctgtctgctgtgcttcaccgtggctactacaaggctacacatagagataagtttccatat
gagcgtcggcccgcatccaaggcttacattcctgccggtgaaggagactactattacact
gccgctgtctggggtggttatctggaggaaatgtacaagctagtcaaatattgttacgtg
cagtcagaggaggatgccaagaataagattgaagctgtgtggcaggaagagagtcacctc
aacaagtacctgctgtacaacaaaccaaccaaggtgctgtctccagagtacctgtggtca
gactatgatcagataccgtcagacatcaaagtcgtcagaatctcccagctggtcaagaat
tatgcagaagtgcgacccaatggtggacagtga
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