Scomber japonicus (chub mackerel): 128357558
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Entry
128357558 CDS
T09718
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H
KO
K06840
semaphorin 3
Organism
sjo
Scomber japonicus (chub mackerel)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
V-set
Ig_3
PSI
ig
WD40
I-set
PapC_C
JmjC_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
128357558
NCBI-ProteinID:
XP_053173897
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All DBs
Position
4:11681947..11732768
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AA seq
766 aa
AA seq
DB search
MYWPVTAVLLAHLGATLTGAWRASQPRLQFTYSELIQNGRLLTLPLVAGDLHSLLPDEDG
RRLYVAMKDNMLSTSLDDITQNPRKLYWPASPDRVQECLMAGKDPELECANFLRVLQPFN
QTHLYVCGTGAFNPRCAFIPTSIFQQSEYQTLSYSRTECGKGKCPYDPFQKTASAVVDGE
LYAGITSDFMSRDSAFFRSLGNRHVIRTEQYDSTWLQDAQFVRVAPLSETDNPEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGLQTH
FDQLQDIFILQGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRAFKGNFLHKEGPLY
KWAEFTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQENVLPLGERPLLVR
VGVHYKFSKLLVDRVEAIDGTYDVLFIGTDSGLVLKAIHLPREHGQSQEVTLEQLQVFQH
KSPVTALALSKKKQWLFVGSSEGVSQLALFQCELYGQACAECCLARDPYCTWDGHACSPF
MPTVRRRNARHLGEDEDPLTQCVRQGAGLQVEAEQRVMMVAEGNSTYLECLPRSRHAAVT
WYKQAGENSPELNQVVTGDQMVVIERGVLIRRAELSHGGVYHCQVEEHGYHWTAVTIRLA
VWSPSANRLLASWSSSSYQSVTQETQPWYEDVMALIHPRNLGQHCRALGYRPPRNHRRHG
DVMVEPNKEKEKGERHKHGGGRGGGGARAAGRKSRSKPQQRAPRSA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtattggccggtgacagcggtcctgctagcccacctcggggccaccttaacgggggca
tggagagcatctcaaccaagactgcagttcacatactctgaactgatccagaatggccgg
ctgctgacactgcccctagtggcgggagacctgcactccctgctgcctgatgaagatggg
agacgtctatacgtggctatgaaagataacatgctgtctaccagtctggacgacataaca
cagaatccacgcaagttgtattggccagccagtccagaccgtgtccaagaatgcctcatg
gctgggaaggatccagagcttgagtgtgctaacttcctgcgagttctgcagccttttaac
cagactcatctgtacgtgtgtggcaccggggctttcaaccctcgatgtgctttcattcct
accagcatctttcaacagtcagagtaccagactctctcctatagccggacagagtgtggg
aaggggaaatgtccctatgatccgttccagaaaacagcgtcagctgttgttgatggagag
ctttatgctggcatcacttcagacttcatgagcagggactctgccttcttccgtagtctt
ggtaatcgtcatgtcatccgcaccgaacagtacgactccacctggctgcaggatgcccag
tttgtgcgggttgcgccgctgtctgaaactgataatccagaagacgataaggtctacgtg
ttcttcactgagcgcgctcaggaggccgagggggctgctgggaaggtgctctactccaga
gtggcacgtgtgtgcaagaatgacattggaggccagaggagtttagttaacaagtggagc
accttccaaaaggctcgtatggtgtgttcagttccaggaccagatggcctacagacgcac
tttgaccaactgcaggacatctttatcctccaggggaaagacaagaagaaccctctcatc
tatggcctttttaccacttcaagtgatatcctgaatggttcagcagtgtgcgtttaccga
atggaggatgtggtccgggcttttaagggaaacttccttcacaaagaaggtcctctgtat
aagtgggcagagtttacaggcaaggtgccctacccgcgaccaggaacttgtcccagcagt
acatatggaagctacagttcaaccagagagtatcctgacgatgtcatcttcttcagcagg
actcacccactgttgcaggagaatgtgctgccactcggggagcgtcccctccttgttaga
gtgggtgttcactacaagttcagcaaactgctggtggacagagtggaggccattgacggc
acctatgacgtcctcttcatcggcacagattctggtctggtgctgaaggccatccatctg
cccagagaacatggtcagagtcaggaggttactcttgaacagctgcaggtcttccagcac
aaatcacctgtgacagctctggcactgtcaaagaaaaagcagtggttgtttgtgggctcc
agcgagggcgtgtcccagctggccctcttccagtgcgagctgtacggtcaggcctgcgct
gagtgctgcctggccagagatccctactgtacctgggacggacacgcctgcagccccttc
atgcccactgtgcgcaggaggaatgcacgtcatttaggggaggatgaggatccgttaacc
cagtgtgtcagacagggagctgggctgcaggtagaggcggagcagagggtgatgatggtt
gccgagggtaacagtacctacctggagtgtctgccccgatccaggcatgctgctgtcacc
tggtacaaacaggctggagagaatagtcctgaactaaaccaggtggtaacaggtgaccaa
atggttgtgattgagcggggtgtcctgattcgtcgggccgagctgtctcacggcggtgtc
taccactgtcaggtggaagagcatggctatcactggacggccgtcaccatccgccttgct
gtctggagtccttcagccaaccgcctcctcgcttcctggtccagctcatcctatcagagt
gtaacacaggaaacacagccctggtacgaggatgtgatggcgctgattcatccaagaaac
ctcggtcagcactgccgcgccctgggatataggcccccacgcaaccaccgtcgccatggt
gatgtcatggtggagcccaacaaggagaaagaaaagggggagaggcacaagcatgggggt
ggaagaggaggaggaggagcaagagcagcgggcaggaagagcaggagcaagccgcagcag
agagcaccgaggagcgcttga
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