Scomber japonicus (chub mackerel): 128357559
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Entry
128357559 CDS
T09718
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00531
Glycosaminoglycan degradation
sjo01100
Metabolic pathways
sjo04142
Lysosome
Module
sjo_M00076
Dermatan sulfate degradation
sjo_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
128357559 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128357559 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
sjo02042
]
128357559 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128357559 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128357559 (si:dkey-72l14.3)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
128357559 (si:dkey-72l14.3)
Bacterial toxins [BR:
sjo02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
128357559 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Enzymes
128357559 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Enzymes
128357559 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
128357559
NCBI-ProteinID:
XP_053173898
LinkDB
All DBs
Position
4:complement(11755233..11761034)
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AA seq
568 aa
AA seq
DB search
MAWTEPRPHPHPKPEPKLTLYNLRTHTSATSFSSASIKAHPPVLLPFLFLLFAAFADLGT
AGPPQKARPPLLYGQPFIIFWGIPDSSCSGRPDPGSFGMEREGRVLVFYEDTLGNYPYFV
ERDTPVNGGLPQHTRLDSHLQKIQQDLETALPAPRYLGLGVVRWSEWVPQWSRNRERQAM
YPEASRNLMKAFFPAWTPEEVEKWSKVDFEAAAQSVMTETLREVKRSRPKALWGVSPYPS
CYTGDPAQTMLANYTGQCPAAEMALNDELLWLWKRCSALYPLLTLEKLQGETSGARLYLS
SQIKEAQRVSSLAGTAFDLPVFPLVKSVYASTNTFLSQADLVSTIGESAAMGTAGVVIWE
RKETKTERECQDLAEFVRKVLGPYSINVTTATRLCSASLCQGKGRCVRQNPDSSAYLHLP
PPSEVLEKVTEKAEAAKTTDQPDTDAKPAEPDPAEIWKKDFQCQWYKTADRDVSDQQSPK
DGASVGGTVEENAGDVVGTTTASTTIASSTKGASGTELRESGSPVTVTGTGSPTPSLAEP
TDCGTSLLTSSNLTVLLLLVALSLCLEP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggaccgagccacggccgcatccacacccaaagccagaacctaaactgacactt
tacaatctcaggactcacacatcagccacatctttctcatcagccagtattaaagcccat
cctccagttttactacccttcctcttccttttatttgctgcctttgctgaccttggtaca
gctggtccaccccagaaagctcgcccccctctcctatatggacagccttttatcatcttc
tggggcatccctgactcttcctgttctggtcggcctgaccctggatcttttgggatggaa
cgggagggccgcgtgttggtcttttacgaggacacattggggaactacccgtattttgta
gagcgagacacaccggtcaatgggggactaccacagcacacacggctggacagccacctt
cagaagattcagcaggacttggagacagctttacctgccccaagataccttgggctaggg
gtcgtacgctggtcagagtgggtcccccagtggtcgcgaaaccgagagaggcaggcaatg
tatcctgaggcatcgaggaacctgatgaaagctttctttcctgcctggaccccggaagag
gtggagaagtggtcaaaggtggactttgaggcagcagcccagtcagtaatgacggagact
ctacgggaggtcaaaaggtcaaggccaaaagcattatggggagtctccccttaccccagc
tgctacactggcgaccctgcccaaaccatgttagccaattacaccggccagtgccctgct
gcagagatggcccttaacgatgagctcctgtggctatggaaacgatgctctgccctctac
cctctcctcaccctggagaagctgcagggtgaaacctctggagccaggctttatttgtcc
agtcaaatcaaagaagcacaacgagtatcatccctggctggaacggcgttcgatcttcct
gtattcccacttgtcaaaagcgtctacgcttcaactaatacattcctatcacaggcagac
ctggtcagcaccataggagagagtgctgccatgggaacagccggagtagtcatctgggag
agaaaagagactaagacagagcgagagtgtcaggacctggcagagtttgtccgtaaagtt
ctgggaccttactccatcaacgtaaccacagcaactcgactgtgctcagcctccctgtgc
cagggaaaaggccgatgtgtccgtcaaaatccagacagctctgcctacctccacctcccg
cccccctccgaagtgctggagaaggtgacagaaaaggcagaggcagcaaagaccacagac
cagccggacacagatgccaaaccagctgaacctgacccagctgagatctggaagaaagac
ttccagtgccagtggtacaagactgcagacagggacgtctcagaccagcagtcccccaaa
gatggggcttctgttgggggaacggtagaagaaaatgctggagatgtagtggggacgacg
acagcctctactacaatagcttcatcaacaaaaggtgcctctgggactgagttaagggaa
agcggttcacctgttactgttactggtactggaagtccaacgccttcactggcagaacct
acagactgcggtacgagtctgctgacttcctcaaacctaactgtcctgctgctgctggtg
gctctaagtctctgcctggaaccttaa
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