Scomber japonicus (chub mackerel): 128357569
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Entry
128357569 CDS
T09718
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128357569 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128357569 (prdm16)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128357569 (prdm16)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
128357569 (prdm16)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128357569 (prdm16)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128357569 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_6th
zf-BED
zf-met
zf-C2H2_8
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
128357569
NCBI-ProteinID:
XP_053173908
LinkDB
All DBs
Position
4:complement(13623839..13640514)
Genome browser
AA seq
1128 aa
AA seq
DB search
MKDGIFPEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSAGSIFDTLREDFKQ
EREDSDEPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSH
DSGKRFECENCDKVFTDPSNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSV
KPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQLFSTTSSLNKHRRFCEGKNHY
GSPAGMFNPGIPMSSSPIMAKAKSHHPHLAGLNQSGLGFTDYFPSRPHPHAGLPFSPGPH
GFPSLPHGFPGIFPPSLYPRPPLLPASPLIKSPLGSSSQEVKLPRSPLDAPPLSLVSSTN
SNGGNSLSQGEDKERENKLDLSSSGEAKPKSKMVDMSDGSDLEDVNTTSGTDLDTTTGTA
SGDGSDLDSDGESERERSGKRRKPSGATSSQEGNQLEDTNSALLSAVSSSGNLAIDRPFL
SSASTQHSFFPPPDEQALPPTTTNANAATTDSIKAIASIAEKYFGPGLIGLHQEKKMGPL
PYHSMFPFQFLPNFHNSLYPFSADRGALNPSMFFKAEPKSPREQLHKMVSGAPEAPAHTA
ESPFDLTIKPKETKLAPPTPTNPSNPNSSTGSSSGPLAISSGEEQPLDLSIGSRNRGGHN
GVTAEPHNRKNHMYGVGKGCSIKDETPGQPHQPPPLHYAKPSAFFMDPIYSRVEKRKLLD
PVGALKEKFLRPSPPLFHPQMSAMENMTEKLESFGALKLDTPPNSLQHSAHPLFNFRSPP
PSLSDAILRKGKERYACRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQR
HVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGMLSNLGTTISSPNS
EPDNHALLDEKEDSYFSEIRNFISNSEMNQASSSTDKRSDQAEEERPPSHSLSNSKLGLQ
GLDEEEEEAEGDDEEEEEGSLTEKSHDEAPESPSPVTTGVYEEDDEEEETETAPLSMSYE
HTRRCIEEEGSLLDLEGLPSFPKSLDGLRKAASDEQPFDVKDIFNTSLESEALKETLYRQ
AKTQAYAMMLSLSENNPLHAPSQNSLDAWLSMGGGPSETSSFHPLNHI
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacggtattttccccgagggatccatggcacccaacctacaagacgagcagatg
taccgctgtgaagactgtgatgagctgttctcctcaacacttgagctgcggcggcaccag
aagtattcttgctccagtgccggttccatttttgacacactgagagaggacttcaaacag
gaacgcgaagacagcgacgagcctgtccacgagtgtaaagactgtgagaagatcttccca
aatgagtacagtctgggccaacacatgatagtccatacagaagagagggagtacaagtgt
gaccagtgtcccaaagccttcaactggaagtccaacctcatccgtcaccagatgtcacat
gatagtggcaaacgctttgagtgtgaaaattgtgataaggtattcacagatcccagcaac
cttcagcgccacatccgctcccagcacgtgggggcacgtgctcacacatgtcctgagtgt
ggcaagacctttgccacctcgtcaggcctcaagcagcataagcacatccacagcagtgtc
aaaccctttatctgcgaggtgtgccacaaatcctatacccagttctccaacctctgccgc
cacaagcgtatgcatgctgactgccgcacccagattaaatgcaaggactgtgggcagttg
ttcagcactacctcctccctcaacaagcatcgccgcttctgtgagggcaaaaaccattac
ggctctccagcagggatgttcaatcctggtatcccaatgagctccagccccatcatggcc
aaggccaagtcccaccatccccaccttgctggtctaaaccagtcaggtttaggcttcact
gactactttccctccagacctcaccctcatgctggcttgcccttctcgccaggaccccat
ggcttcccatccctcccacatggtttcccaggtatcttccccccatcactatatccgcga
ccgcctttattgccggccagcccattgataaagagcccattgggcagcagcagtcaggag
gtgaagctgcctcggagtcccttagatgcccctccactgtccctggttagctccacaaac
agcaatggaggtaacagtttgagtcaaggggaagacaaagagagagagaacaaactggat
ttgtcttctagtggagaagccaagccaaaatctaagatggttgacatgtctgatggtagt
gaccttgaagatgttaataccacaagtgggacagatttggacaccaccactggtaccgct
tcaggtgatggttctgacctggacagtgatggagagagtgaacgtgagcgaagtggtaaa
agaaggaagccgtctggagccacatcaagtcaagaaggcaaccaattagaagacacaaat
agtgcgttgttatcagccgtgtctagttcgggtaacctcgctattgatcgcccttttctc
tcttctgcatcaactcagcactccttcttcccaccacctgatgagcaagccctccctcca
accaccacaaatgccaatgcagccaccactgattccatcaaagccatcgcctctattgct
gagaaatattttggtccaggtttgattggtcttcatcaggagaagaagatgggtccattg
ccctaccactccatgtttcccttccagttcctgcccaacttccacaactccctataccca
ttcagtgctgatcgaggtgctctcaatcctagcatgttctttaaagcagagcccaagtca
cctcgtgagcaactgcataagatggtttctggggccccagaagctcctgctcatacagca
gaatcaccatttgatctcaccataaagcccaaggagaccaagttagctcctcccacccca
acaaacccctcaaacccaaacagtagtactggaagtagtagtggacctttagcaatatct
agtggtgaagaacagccactcgatctcagcataggcagccggaaccgaggtggtcataat
ggtgtgacagctgagccacataatcgaaagaaccacatgtatggagttggaaaagggtgc
tccatcaaggatgaaaccccaggacagccacaccagccaccacccctgcactatgccaag
ccctccgcattcttcatggaccccatatacagcagggtggagaagaggaagctacttgac
cccgtaggagccctgaaggagaagttcctcaggccttcaccaccactcttccatccacag
atgtcagccatggagaacatgacagagaagctggagagctttggtgccctaaaactggac
acgccgcccaattcactgcaacattcggctcatccactgttcaacttccgctcaccacca
ccttctctctcagacgccatcctacgcaagggcaaggagcgctacgcctgcaggtactgt
gggaaaatcttccctcgttcagcaaacctcaccagacacttgcggacacacacaggcgaa
cagccatacaggtgtaaatactgtgaccgctcattcagcatctcatccaatctccaacgc
cacgttcgcaacatccataacaaggagaaacccttcaagtgtcacctgtgcaaccgctgc
tttggtcagcaaaccaacctcgaccgccatctcaagaagcacgagcatgagaacattcct
gtgagccaacagtccgggatgctttccaacctaggaaccaccatctcctcgccaaactcc
gagccagacaatcatgcacttttagatgagaaggaggactcatacttctcagaaatccgc
aacttcatttccaacagtgagatgaaccaggcctccagctctacagataagagatcagac
caggcagaggaggagcgcccacccagccacagtttgtctaactccaagctagggcttcag
gggttggatgaggaggaagaggaagcggagggcgacgatgaggaggaggaggaaggcagc
ctgacagaaaagtctcacgatgaggcgcctgagtccccgtctcctgtcacgacaggagtg
tatgaagaagacgacgaggaggaagagacagagacggctccattatctatgagctacgaa
cacactcgcaggtgtatagaggaggagggctctctcttggatcttgagggtctgcccagc
tttcccaagagcctggatgggttacgtaaagcagccagtgacgagcaaccctttgatgtt
aaagacatatttaacacttcactagagtcggaagcattgaaagagacattgtacaggcag
gctaaaacccaggcttatgcaatgatgctgtctctctcggagaacaaccctttgcacgcg
ccctcccagaactctctggatgcttggctgagcatgggaggtggaccgtctgagacgagc
agctttcacccgctcaaccacatctag
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integrated database retrieval system
