Scomber japonicus (chub mackerel): 128357575 Help Entry 128357575         CDS       T09718                                  Symbol tdp1 Name (RefSeq) tyrosyl-DNA phosphodiesterase 1   KO K10862   tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo03410   Base excision repair Brite KEGG Orthology (KO) [BR:sjo00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     128357575 (tdp1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sjo03400]     128357575 (tdp1) DNA repair and recombination proteins [BR:sjo03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      128357575 (tdp1) SSDB OrthologParalogGFIT Motif Pfam:  Tyr-DNA_phospho Motif Other DBs NCBI-GeneID:  128357575 NCBI-ProteinID:  XP_053173917 LinkDB All DBs Position 1:9751376..9759661 Genome browser AA seq 621 aa AA seqDB search MSQDSQHGKWTISSSDDDDDEVLPPSGTTVSKSHRVPDSSHCSNSHPSPKLEPATTSVEV KPEPAPVSSLLIGSEARQLAAVNQLNPVKYESSPSLAGKRKKDVSDGSGWALSDSDDDDD DAVNGKSVSKVSPKRQPPSPKAKKAKVENERPPSPHGRFYYIDEPEDFFESSVPCLNDTY RFYLNKVTGLDRKYNNGALHIRDILSPLFGTLKESVQFNYCFDIAWMVQQYPPEFRDLPV LIVHGDKREAKARLVQQAQPYPQVRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIILTSNL IRADWYQKTQGMWMSPLFPRLPKGSSTSAGESPTFFKRDLLEYLMSYRAPELEEWIQRIK EHDLSETRVYLVGSTPGRYVGADMERWGHLRLRKLLYDHAEPIPGEERWPVVGQFSSIGS MGLDKTKWLAAEFQRTLTTLGKNSLRPDPPVHLVYPSVDDVRTSLEGYPAGGSLPYSIQT AQKQLWLHSYFHRWKANSTGRTHAMPHIKTYLRASPDFTELAWIVITSANLSKAAWGALE KNNTQVMVRSYELGVLYLPSAFNMKTFPVHKNPFPASSSSSGFPVPFDLPPAHYSSKDQP WIWNIPYNQAPDTHGNIWVPS NT seq 1866 nt NT seq  +upstreamnt  +downstreamnt atgtctcaggatagtcaacatggcaagtggaccatatccagcagtgatgatgacgatgat gaggttcttcctccttctgggactactgtgtcaaagtcccaccgagtacctgacagctcc cactgttctaactctcacccctcccccaaactggaaccagcaacaaccagtgtggaggtg aaaccagaaccagctcctgtatcctcgcttctcattggctctgaggccagacaattagct gcagtaaaccagttgaatccagtaaagtacgagtccagtccttcgttggctggaaagcgt aaaaaggatgtttcagatggatcaggctgggccctctcagatagtgatgatgatgatgat gatgcagtcaatgggaagagtgtcagtaaagtgtcaccaaagaggcagcctccaagcccc aaagctaagaaagcgaaggtggagaatgagcgtcctcccagcccccacggccgcttctac tatatcgatgagcccgaggacttctttgaatccagtgttccttgcctgaatgacacatac aggttctacctcaacaaagtcaccggcctggacaggaagtataacaacggagctctgcac atcagagacatcttgtctccgttatttgggacgttgaaagaatccgttcagttcaactac tgctttgatattgcctggatggttcagcagtacccaccagagtttagggaccttccagtt ctgattgtccatggggataagagggaggccaaggcccgactggtgcagcaggctcagccc taccctcaagttcgattctgccaggccaaactggatattgcttttggaactcaccacacg aagatgatgttgctgtggtatgaggaaggcttcagagtcatcattctcacctccaacctc atcagagctgactggtaccagaaaacacaaggtatgtggatgagccccctgttcccacgg ttaccaaaaggcagcagcacgagtgcgggtgagtcgcctaccttctttaagagggacctg ctggaatacttgatgtcgtaccgtgcaccagagctggaagagtggatccaacgaatcaaa gagcatgacctgtcagagacaagggtgtatttggtcggctcaaccccagggaggtacgtt ggtgcagacatggaacgctggggccacctgaggctgaggaagctgttgtatgaccacgca gagcctattcccggtgaggaacggtggcctgtggtcggccagttctccagcatcggctcc atgggactggataagaccaagtggttggcggcggagtttcagcgcaccctgaccacactg gggaagaactctcttcggccagacccccctgttcacttggtatatccatcagtagatgat gtgaggactagtttggaaggctatcctgcggggggatctcttccctacagcatccagaca gctcagaaacagctctggctccactcctacttccaccgttggaaggcgaactcgacaggc aggactcatgcaatgccacacatcaagacatacctgagggcttcgccagatttcactgaa ctggcctggatcgtcatcacaagtgccaacctgtctaaagcagcatggggtgcactagaa aagaacaacactcaggtgatggttcgatcatatgagctgggagtcctctacctgccgtct gcctttaacatgaagacctttcctgttcacaaaaatccatttcctgcctcctcatcctcc tctggttttcctgtgccctttgacctcccccccgcacactactcttctaaagatcagcct tggatctggaacatcccgtacaaccaggctcccgacacacacggcaacatctgggttccc tcctga

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