KEGG   Scomber japonicus (chub mackerel): 128357639
Entry
128357639         CDS       T09718                                 
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5
  KO
K07374  tubulin alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04210  Apoptosis
sjo04530  Tight junction
sjo04540  Gap junction
sjo04814  Motor proteins
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128357639 (tuba5)
  09143 Cell growth and death
   04210 Apoptosis
    128357639 (tuba5)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128357639 (tuba5)
   04540 Gap junction
    128357639 (tuba5)
  09142 Cell motility
   04814 Motor proteins
    128357639 (tuba5)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128357639 (tuba5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128357639 (tuba5)
   03036 Chromosome and associated proteins [BR:sjo03036]
    128357639 (tuba5)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128357639 (tuba5)
   04147 Exosome [BR:sjo04147]
    128357639 (tuba5)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128357639 (tuba5)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128357639 (tuba5)
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128357639 (tuba5)
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128357639 (tuba5)
  Exosomal proteins of other body fluids (saliva and urine)
   128357639 (tuba5)
  Exosomal proteins of colorectal cancer cells
   128357639 (tuba5)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 128357639
NCBI-ProteinID: XP_053173981
LinkDB
Position
4:25639508..25644816
AA seq 452 aa
MWRRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFLDNPTGPNSREDPFNTFFNTGS
SGRHVPRALYVDLEPTVVDEVRVGKYKELFHPEQMISGKEDAANNYARGHYTVGKEIIDA
VMERVRKMTDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPHV
STAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNMDIESPGYINLNRLIGQIVSS
ITASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYSPIISAEKAYHEQLTVAEITSACFE
PTNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINY
QRPTAVPGGDLAKVQRAVCMLSNTTAIAEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGE
FAEAREDLASLEKDYEELGDMPFDSDNEDEEY
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtggaggagagagtgtatctccatccatgtgggtcaggcaggtgtgcagacaggtaac
gcctgctgggagctcttctgtctcgagcacggcgtcggtcctgacggggtcttcctggac
aatcctacgggaccgaactctcgtgaagacccgttcaacactttcttcaacactgggagc
tctgggcgtcatgttccccgagccttatacgtcgacctggagcccacagtggttgatgaa
gtgagggttggaaagtacaaagagctcttccacccggagcagatgatctctggaaaggag
gatgcagccaacaactacgcccgtggccattatactgtgggaaaagaaatcatcgatgca
gtcatggagcgcgtccgcaaaatgacggaccagtgcacaggcctgcagggtttcctcgtc
ttccacagtttcggaggaggaactggctctggcttcacctccctgctgatggagcgtctc
tctgtcgactacggcaagaaatccaagttggagtttgccgtttacccagctccacatgtg
tccaccgctgtggtggagccctacaacgccatcctgaccacccacaccaccttagagcac
tccgactgtgccttcatggtggacaacgaggccatctatgacatatgtcgccgtaacatg
gatatcgagagtcctggctacatcaacctcaacagattgattggtcagattgtctcctcg
attaccgcctcccttcgtttcgatggcgctctcaatgttgatctgacagagttccagacc
aacctggtcccgttcccacgtatccacttccctctggtgacctactcgcccatcatctcc
gctgagaaggcttaccacgagcagctgaccgtggctgagatcacgagcgcctgctttgaa
ccgaccaatcagatggtcaaatgtgatcctcgtcacggcaagtacatggcctgctgcatg
ctgtaccgaggggacgtcgtcccaaaggatgtcaatgctgccatcgcgagcataaagacg
agacgctccattcagtttgtggactggtgcccaactggcttcaaggtgggcatcaattat
cagcgtccgactgcagttcccggtggagaccttgccaaagtgcagagggccgtgtgcatg
ctgagcaacaccaccgccatcgctgaggcctggtcccgtctcgatcacaagtttgacctc
atgtacgctaaacgtgccttcgtccactggtacgtgggtgaaggcatggaggagggagag
tttgccgaggccagagaggacctggccagtctcgaaaaggactacgaggagctgggtgac
atgcccttcgattctgacaacgaggacgaagaatactga

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