Scomber japonicus (chub mackerel): 128357639
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Entry
128357639 CDS
T09718
Symbol
tuba5
Name
(RefSeq) tubulin alpha 5
KO
K07374
tubulin alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04210
Apoptosis
sjo04530
Tight junction
sjo04540
Gap junction
sjo04814
Motor proteins
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128357639 (tuba5)
09143 Cell growth and death
04210 Apoptosis
128357639 (tuba5)
09144 Cellular community - eukaryotes
04530 Tight junction
128357639 (tuba5)
04540 Gap junction
128357639 (tuba5)
09142 Cell motility
04814 Motor proteins
128357639 (tuba5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128357639 (tuba5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128357639 (tuba5)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128357639 (tuba5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128357639 (tuba5)
04147 Exosome [BR:
sjo04147
]
128357639 (tuba5)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128357639 (tuba5)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128357639 (tuba5)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128357639 (tuba5)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128357639 (tuba5)
Exosomal proteins of other body fluids (saliva and urine)
128357639 (tuba5)
Exosomal proteins of colorectal cancer cells
128357639 (tuba5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128357639
NCBI-ProteinID:
XP_053173981
LinkDB
All DBs
Position
4:25639508..25644816
Genome browser
AA seq
452 aa
AA seq
DB search
MWRRECISIHVGQAGVQTGNACWELFCLEHGVGPDGVFLDNPTGPNSREDPFNTFFNTGS
SGRHVPRALYVDLEPTVVDEVRVGKYKELFHPEQMISGKEDAANNYARGHYTVGKEIIDA
VMERVRKMTDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPHV
STAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNMDIESPGYINLNRLIGQIVSS
ITASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYSPIISAEKAYHEQLTVAEITSACFE
PTNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINY
QRPTAVPGGDLAKVQRAVCMLSNTTAIAEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGE
FAEAREDLASLEKDYEELGDMPFDSDNEDEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggagagagtgtatctccatccatgtgggtcaggcaggtgtgcagacaggtaac
gcctgctgggagctcttctgtctcgagcacggcgtcggtcctgacggggtcttcctggac
aatcctacgggaccgaactctcgtgaagacccgttcaacactttcttcaacactgggagc
tctgggcgtcatgttccccgagccttatacgtcgacctggagcccacagtggttgatgaa
gtgagggttggaaagtacaaagagctcttccacccggagcagatgatctctggaaaggag
gatgcagccaacaactacgcccgtggccattatactgtgggaaaagaaatcatcgatgca
gtcatggagcgcgtccgcaaaatgacggaccagtgcacaggcctgcagggtttcctcgtc
ttccacagtttcggaggaggaactggctctggcttcacctccctgctgatggagcgtctc
tctgtcgactacggcaagaaatccaagttggagtttgccgtttacccagctccacatgtg
tccaccgctgtggtggagccctacaacgccatcctgaccacccacaccaccttagagcac
tccgactgtgccttcatggtggacaacgaggccatctatgacatatgtcgccgtaacatg
gatatcgagagtcctggctacatcaacctcaacagattgattggtcagattgtctcctcg
attaccgcctcccttcgtttcgatggcgctctcaatgttgatctgacagagttccagacc
aacctggtcccgttcccacgtatccacttccctctggtgacctactcgcccatcatctcc
gctgagaaggcttaccacgagcagctgaccgtggctgagatcacgagcgcctgctttgaa
ccgaccaatcagatggtcaaatgtgatcctcgtcacggcaagtacatggcctgctgcatg
ctgtaccgaggggacgtcgtcccaaaggatgtcaatgctgccatcgcgagcataaagacg
agacgctccattcagtttgtggactggtgcccaactggcttcaaggtgggcatcaattat
cagcgtccgactgcagttcccggtggagaccttgccaaagtgcagagggccgtgtgcatg
ctgagcaacaccaccgccatcgctgaggcctggtcccgtctcgatcacaagtttgacctc
atgtacgctaaacgtgccttcgtccactggtacgtgggtgaaggcatggaggagggagag
tttgccgaggccagagaggacctggccagtctcgaaaaggactacgaggagctgggtgac
atgcccttcgattctgacaacgaggacgaagaatactga
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