KEGG   Scomber japonicus (chub mackerel): 128357696
Entry
128357696         CDS       T09718                                 
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
  KO
K16499  protocadherin delta 2
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sjo04515]
    128357696 (pcdh17)
Cell adhesion molecules [BR:sjo04515]
 Cadherins
  Protocadherins
   128357696 (pcdh17)
Motif
Pfam: Cadherin Cadherin_2 PepSY Cadherin_C_2
Other DBs
NCBI-GeneID: 128357696
NCBI-ProteinID: XP_053174044
LinkDB
Position
1:26808573..26866458
AA seq 1141 aa
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQTGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPIFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREAQDEYN
VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIHENNIPGEYLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDNVSPIVELIIRVSDHGKPTLTAAARLI
VKASNGHTVDGLLHVDDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPNEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAT
GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMESVP
ETETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CSSMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTRDQGVYPPLPPSDPVA
KVLAEARSRISQETTGEMECVLEQVDPEANRDGMDADQVVRDIDKLLQDCRGSEATGTLR
K
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgtatctttctattttctttttcctcctcttatgggctcaagccctgacattaaaaaac
ttgaattactctgtcccggaggaacagggtccagggacagtgattgggaacattgccaaa
gatgccagacttggactggaacagactgggcagggaggacagggtaagaaagccaacttc
agggtgttggagaactcagccccgcatcttatcgacgtggacccacagagtggactgctg
tacacaaagcagcgcattgacagggaaacattgtgtaagagaaaccccaagtgccagctc
tccatggaggtgtttgccaatgacaaggagatctgcatgatcaaaatagatattcaggac
attaacgacaactcacccatcttcccctcagatcagattgatattgacatttctgaaaac
gcagtgccagggacacggtttcccctgaccagcgcgcatgacccagatgcaggggaaaat
ggcctgaaaacgtatcaaataacacgcgacgactacaatctcttttccttggaggtaaaa
tcccgtggggacgggactaaattccctgaattagttattcaacgaccattagacagagaa
gaaagaagccatcacactcttattttgtcagctactgatggtggggaatatcctaggtca
ggtaccatgcagataaatgttaaagttatcgattccaatgataacagtcccgtgtttgat
cagccctcatacgttgtcgaaattccagaaaattcacctcctggcaaagtcctgatcgat
ttaaatgccactgatcctgatgagggcaacaatggacaagtagtctattcttttagtggc
tatgccccagagagaatccgggagctcttctccatagattccagaacaggggtcataaag
attcagggggaaattgactatgaagagagcccagttatagagattgacgttcaggcaaag
gatctaggtcccaatccaatcccaggccattgtaaagtcactgttaaagtgcttgacagg
aatgataactggccgtctataggctttgtgtctgtgagacagggagccatcagcgaggca
gcacctccaggcactgtgattgctctggtccgtgtcacagacaaggactcaggcaggaat
gggcagcttcagtgcagagtgctgggtaatgtcccgtttaaacttgaggaaaactatgat
aacttctacacagtggtgacagacaggcccttggacagagaggcgcaggatgagtataat
gtcaccattgtggccaaagacaatggcattccccctctaaactccactaaatccttcact
gtaaagattctggatgagaatgacaacgttcctcgctttaccaagtccgtttaccttctt
cagatacatgagaacaacatcccaggggagtacttaggttcagttctggcccatgatcca
gacctcggacagaatggcactgtgtactacagtataatcaactctaatgtgagtgggggt
gatgtcaacacctatgttaatgtgaatgcggccaatggagctatatatgcagttagatcc
ttcaactatgagcaaataaaatattttgacttcaaggttcttgctaaagatgctggatct
ccacatctggagagcaacgctactgtgcgcatcagtgttctggatgtcaatgacaacatc
cctgtcatagtgctgcccctgctccaaaatgacactgctgaaatccatgttccgcgtaat
gttggtgttggttacattgtcaccacagtgagggcagtggataatgattatggcgaaagt
gggaggctcacctatgagatctcagatggcaatgaggagcatctttttgagattgatcca
gtgactggggaggtgcgaacagctcacccattctgggacaatgtcagcccaattgtggag
ctgatcatacgagtgtcggaccatgggaagccaacactcactgctgccgccaggcttatt
gtcaaggcctccaatggacatactgtcgatggactgctacatgtggacgacaatcagaac
tgggacatgtccctgcctctcattgtaactctcagcataatatccatcatgcttttggct
gccatggtgactatagcaatcaagtgcaagcgggaaaataaggagatccgtacctacaat
tgtcgcattgcagaatactcgcaccctcagctggggaaaggcaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtaatg
aatgtggtaagcagtccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacccctactaaccgcatgtccatcatacagactgacaatttccccaacgagcct
aattatatgggtagcagacaacagtttgttcaaagtagttcgacattcaaagacccagag
cgagcaagcctcagagacagtggtcatggtgacagtgaccaggctgacagtgaccaggac
accaacaaaggttcctgctgtgatatgtctgcaaaggaagccctcaagttaaaggctaca
ggcgttaaaccaccacctttggagcaagatgaggattgcgtgaattgtacagaggagtgc
agagtactgggtcactctgaccgctgctggatgccccaattcccagctggaggaaaccag
gcagagggtgtcgactaccgcaacaacatgttcgtgccagcaggaatggaatccgtgcct
gagacagagacctacgagacagtcaaccccaacggcaagaagacgttctgtacatttggc
aaagagcggcgtgaccacaccatactggttgccaacgtgaagccctacttgaaggcgaaa
cgtgccctcagcccactgctccaagaggtaccctcagcgtcaagcagtcctaccaagggc
tgctccagcatgtctccttgctcctcagtcaaaagcccagctgatggggctgaaggcaaa
cctcctcctgccacctgctccggtcactatgggcctcctgatggtcaatacctgtcacca
accaaacaaaccagggaccagggggtctacccacccttgcctccatcagacccagtggcc
aaggtgctcgccgaggcccgctccaggatcagccaagagacaacaggtgaaatggagtgt
gtcctggagcaggtggatcctgaagcgaaccgtgacggaatggacgctgaccaggtggtg
agagacatcgacaaactattgcaggactgcagaggaagtgaggccactggcacactcagg
aagtga

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